Tableau information
Concept source: d3eb2b_ amino acid (a.a.) range (THR147)(GLN227)
nSSEs in this Concept: 7
String of secondary struct.elems. (SSEs) defining this concept: HEHEHEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(THR147) (ALA155) H1
(ARG161) (SER167) E2
(ARG172) (GLY181) H3
(GLN185) (SER190) E4
(ILE193) (GLY201) H5
(VAL203) (GLY208) E6
(PRO214) (GLN227) H7
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 154.8° E2
H3 -38.0° 167.2° H3
E4 132.5° -22.7° 169.9° E4
H5 -59.0° 144.8° -23.1° 166.8° H5
E6 110.8° -51.3° 137.5° -34.8° 155.9° E6
H7 -85.3° 114.3° -55.3° 133.9° -33.2° 163.7°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±10.9° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2pz0b_ : (TYR103) (MET187) [view usage] : c.1.18.0 |TIM beta/alpha-barrel |PLC-like phosphodiesterases |automated matches |automated matches |Thermoanaerobacter tengcongensis [TaxId: 273068]
d4guha_ : (GLU152) (GLN251) [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |automated matches |Salmonella typhimurium [TaxId: 90371]
d3sjna2 : (LEU233) (CYS319) [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Shewanella pealeana [TaxId: 398579]
d1vlwa_ : (SER72) (LYS145) [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |KDPG aldolase |Thermotoga maritima [TaxId: 2336]
d3cu2b_ : (ALA59) (TYR144) [view usage] : c.1.2.0 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |automated matches |automated matches |Histophilus somni [TaxId: 205914]
d1rv8b_ : (GLY57) (LEU152) [view usage] : c.1.10.2 |TIM beta/alpha-barrel |Aldolase |Class II FBP aldolase |Fructose-bisphosphate aldolase (FBP aldolase) |Thermus aquaticus [TaxId: 271]
d4n2ya_ : (VAL145) (LYS228) [view usage] : c.1.2.0 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |automated matches |automated matches |Archaeoglobus fulgidus [TaxId: 2234]
d1q7qa1 : (GLU340) (TYR430) [view usage] : c.1.21.2 |TIM beta/alpha-barrel |Dihydropteroate synthetase-like |Methyltetrahydrofolate-utiluzing methyltransferases |Cobalamin-dependent methionine synthase MetH, C-terminal domain |Thermotoga maritima [TaxId: 2336]
d2c71a1 : (SER550) (GLY654) [view usage] : c.6.2.3 |7-stranded beta/alpha barrel |Glycoside hydrolase/deacetylase |NodB-like polysaccharide deacetylase |Xylanase XynA C-terminal domain |Clostridium thermocellum [TaxId: 1515]
d3eb2a_ : (THR147) (GLN227) [view usage] : c.1.10.0 |TIM beta/alpha-barrel |Aldolase |automated matches |automated matches |Rhodopseudomonas palustris [TaxId: 1076]
d1gylb_ : (THR34) (GLU145) [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |Glycolate oxidase |Spinach (Spinacia oleracea) [TaxId: 3562]
d3gdma_ : (THR40) (VAL140) [view usage] : c.1.2.3 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Decarboxylase |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2vx4a_ : (SER235) (ALA360) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Pseudomonas cellulosa (Cellvibrio japonicus) [TaxId: 155077]
d2pcqa_ : (LEU136) (GLY214) [view usage] : c.1.10.0 |TIM beta/alpha-barrel |Aldolase |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
d3qz6a_ : (ASN23) (ALA107) [view usage] : c.1.12.0 |TIM beta/alpha-barrel |Phosphoenolpyruvate/pyruvate domain |automated matches |automated matches |Desulfitobacterium hafniense [TaxId: 272564]
d3cu2a_ : (ALA59) (PRO143) [view usage] : c.1.2.0 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |automated matches |automated matches |Histophilus somni [TaxId: 205914]
d1bf6a_ : (TYR33) (GLY152) [view usage] : c.1.9.3 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Phosphotriesterase-like |Phosphotriesterase homology protein |Escherichia coli [TaxId: 562]
d4mzya2 : (TYR215) (GLN306) [view usage] : c.1.17.1 |TIM beta/alpha-barrel |Nicotinate/Quinolinate PRTase C-terminal domain-like |NadC C-terminal domain-like |Putative nicotinate phosphoribosyltransferase EF2626 |Enterococcus faecalis [TaxId: 1351]
d2hbxa_ : (ALA109) (ILE210) [view usage] : c.1.9.15 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |PP1699/LP2961-like |2-amino-3-carboxymuconate 6-semialdehyde decarboxylase NbaD |Pseudomonas fluorescens [TaxId: 294]
d1nvma2 : (THR28) (GLY133) [view usage] : c.1.10.5 |TIM beta/alpha-barrel |Aldolase |HMGL-like |4-hydroxy-2-oxovalerate aldolase DmpG, catalytic domain |Pseudomonas sp. [TaxId: 306]
d3s4te_ : (ARG42) (TRP148) [view usage] : c.1.9.15 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |PP1699/LP2961-like |automated matches |Polaromonas sp. [TaxId: 296591]
d4guhb1 : (ALA151) (GLN251) [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |automated matches |Salmonella typhimurium [TaxId: 90371]
d2qjia_ : (ASP164) (ASN260) [view usage] : c.1.10.0 |TIM beta/alpha-barrel |Aldolase |automated matches |automated matches |Methanocaldococcus jannaschii [TaxId: 2190]
d3abza1 : (GLU175) (ARG263) [view usage] : c.1.8.7 |TIM beta/alpha-barrel |(Trans)glycosidases |NagZ-like |Beta-glucosidase |Kluyveromyces marxianus [TaxId: 4911]
d1dlia2 : (LYS68) (TYR154) [view usage] : c.2.1.6 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |6-phosphogluconate dehydrogenase-like, N-terminal domain |UDP-glucose dehydrogenase (UDPGDH) |Streptococcus pyogenes [TaxId: 1314]
d1t8qa_ : (MSE267) (ASN356) [view usage] : c.1.18.3 |TIM beta/alpha-barrel |PLC-like phosphodiesterases |Glycerophosphoryl diester phosphodiesterase |Glycerophosphodiester phosphodiesterase GlpQ |Escherichia coli [TaxId: 562]
d2wnqc_ : (THR148) (GLY227) [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |automated matches |Escherichia coli [TaxId: 562]
d2otda_ : (LEU97) (GLU178) [view usage] : c.1.18.0 |TIM beta/alpha-barrel |PLC-like phosphodiesterases |automated matches |automated matches |Shigella flexneri [TaxId: 623]
d1v77a_ : (ASP16) (GLY96) [view usage] : c.6.3.2 |7-stranded beta/alpha barrel |PHP domain-like |RNase P subunit p30 |Ribonuclease P protein component 3, Rnp3 |Pyrococcus horikoshii [TaxId: 53953]
d4lrtc1 : (PRO152) (ASN254) [view usage] : c.1.10.0 |TIM beta/alpha-barrel |Aldolase |automated matches |automated matches |Thermomonospora curvata [TaxId: 471852]
d2i9ua2 : (VAL108) (TYR222) [view usage] : c.1.9.9 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |SAH/MTA deaminase-like |Guanine deaminase |Clostridium acetobutylicum [TaxId: 1488]
d4gvha_ : (SER195) (LEU292) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Salmonella enterica [TaxId: 99287]
d3w02a_ : (THR139) (ILE225) [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |PcrB protein homolog YerE |Staphylococcus aureus [TaxId: 418127]
d1v5xa_ : (ARG10) (VAL93) [view usage] : c.1.2.4 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Tryptophan biosynthesis enzymes |N-(5'phosphoribosyl)antranilate isomerase, PRAI |Thermus thermophilus [TaxId: 274]
d1fqva2 : (ALA239) (ARG319) [view usage] : c.10.1.3 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |RNI-like |Cyclin A/CDK2-associated p19, Skp2 |Cyclin A/CDK2-associated p19, Skp2 |Human (Homo sapiens) [TaxId: 9606]
d1fqva2 : (ARG319) (LEU395) [view usage] : c.10.1.3 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |RNI-like |Cyclin A/CDK2-associated p19, Skp2 |Cyclin A/CDK2-associated p19, Skp2 |Human (Homo sapiens) [TaxId: 9606]
d1ytda1 : (GLY189) (GLY285) [view usage] : c.1.17.1 |TIM beta/alpha-barrel |Nicotinate/Quinolinate PRTase C-terminal domain-like |NadC C-terminal domain-like |Nicotinate phosphoribosyltransferase Ta1145 |Thermoplasma acidophilum [TaxId: 2303]
d1xrsa_ : (ALA310) (MET435) [view usage] : c.1.19.4 |TIM beta/alpha-barrel |Cobalamin (vitamin B12)-dependent enzymes |D-lysine 5,6-aminomutase alpha subunit, KamD |D-lysine 5,6-aminomutase alpha subunit, KamD |Clostridium sticklandii [TaxId: 1511]
d1qwga_ : (ILE147) (ARG241) [view usage] : c.1.27.1 |TIM beta/alpha-barrel |(2r)-phospho-3-sulfolactate synthase ComA |(2r)-phospho-3-sulfolactate synthase ComA |(2r)-phospho-3-sulfolactate synthase ComA |Methanococcus jannaschii [TaxId: 2190]
d3n2ta_ : (ARG104) (LYS200) [view usage] : c.1.7.0 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |automated matches |automated matches |Gluconobacter oxydans [TaxId: 442]
d3s4tb_ : (ARG42) (TRP148) [view usage] : c.1.9.15 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |PP1699/LP2961-like |automated matches |Polaromonas sp. [TaxId: 296591]
d2i14a1 : (ASP186) (ILE279) [view usage] : c.1.17.1 |TIM beta/alpha-barrel |Nicotinate/Quinolinate PRTase C-terminal domain-like |NadC C-terminal domain-like |Nicotinate-nucleotide pyrophosphorylase PF1904 |Pyrococcus furiosus [TaxId: 2261]
d1b5ta_ : (THR95) (GLY202) [view usage] : c.1.23.1 |TIM beta/alpha-barrel |FAD-linked oxidoreductase |Methylenetetrahydrofolate reductase |Methylenetetrahydrofolate reductase |Escherichia coli [TaxId: 562]
d1wdwe_ : (ALA122) (GLY213) [view usage] : c.1.2.4 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Tryptophan biosynthesis enzymes |Trp synthase alpha-subunit |Pyrococcus furiosus [TaxId: 2261]
d4iqdb_ : (THR139) (GLY233) [view usage] : c.1.12.0 |TIM beta/alpha-barrel |Phosphoenolpyruvate/pyruvate domain |automated matches |automated matches |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
d2ooga_ : (ILE245) (LYS309) [view usage] : c.1.18.0 |TIM beta/alpha-barrel |PLC-like phosphodiesterases |automated matches |automated matches |Staphylococcus aureus [TaxId: 158879]
d1jcmp_ : (SER96) (GLY177) [view usage] : c.1.2.4 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Tryptophan biosynthesis enzymes |Indole-3-glycerophosphate synthase, IPGS |Escherichia coli [TaxId: 562]
d3azra_ : (GLU37) (ASP161) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Thermotoga maritima [TaxId: 243274]
d1t8qd_ : (ALA266) (ASN356) [view usage] : c.1.18.3 |TIM beta/alpha-barrel |PLC-like phosphodiesterases |Glycerophosphoryl diester phosphodiesterase |Glycerophosphodiester phosphodiesterase GlpQ |Escherichia coli [TaxId: 562]
d3eb2b_ : (THR147) (GLN227) [view usage] : c.1.10.0 |TIM beta/alpha-barrel |Aldolase |automated matches |automated matches |Rhodopseudomonas palustris [TaxId: 1076]
d1ydya_ : (ALA266) (ASN356) [view usage] : c.1.18.3 |TIM beta/alpha-barrel |PLC-like phosphodiesterases |Glycerophosphoryl diester phosphodiesterase |Glycerophosphodiester phosphodiesterase GlpQ |Escherichia coli [TaxId: 562]
d3nv8a_ : (ALA234) (ARG322) [view usage] : c.1.10.8 |TIM beta/alpha-barrel |Aldolase |Class-II DAHP synthetase |Probable DAHP synthetase AroG, phenylalanine-repressible |Mycobacterium tuberculosis [TaxId: 1773]
d1z6ka_ : (PHE21) (ALA103) [view usage] : c.1.12.5 |TIM beta/alpha-barrel |Phosphoenolpyruvate/pyruvate domain |HpcH/HpaI aldolase |Citrate lyase, beta subunit |Mycobacterium tuberculosis [TaxId: 1773]
d1t8qb_ : (ALA266) (LYS357) [view usage] : c.1.18.3 |TIM beta/alpha-barrel |PLC-like phosphodiesterases |Glycerophosphoryl diester phosphodiesterase |Glycerophosphodiester phosphodiesterase GlpQ |Escherichia coli [TaxId: 562]
d3s4ta_ : (ASP38) (TRP148) [view usage] : c.1.9.15 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |PP1699/LP2961-like |automated matches |Polaromonas sp. [TaxId: 296591]
d1btca_ : (ARG326) (HIS442) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |beta-Amylase |Soybean (Glycine max) [TaxId: 3847]
d3w02b_ : (THR138) (ILE225) [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |PcrB protein homolog YerE |Staphylococcus aureus [TaxId: 418127]
d3m7wa_ : (ARG159) (GLN251) [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |automated matches |Salmonella enterica [TaxId: 99287]
d2f7fa1 : (ASN213) (GLN306) [view usage] : c.1.17.1 |TIM beta/alpha-barrel |Nicotinate/Quinolinate PRTase C-terminal domain-like |NadC C-terminal domain-like |Putative nicotinate phosphoribosyltransferase EF2626 |Enterococcus faecalis [TaxId: 1351]
d1uasa2 : (ILE76) (GLY177) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Melibiase |Rice (Oryza sativa) [TaxId: 4530]
d3ve7b_ : (LYS39) (TYR117) [view usage] : c.1.2.0 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |automated matches |automated matches |Metallosphaera sedula [TaxId: 399549]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.10, c.2, c.6