Protein Concepts Dictionary

Tableau information

Concept source:  d1my7b_  amino acid (a.a.) range (GLU193)(PRO290)

nSSEs in this Concept: 9

String of secondary struct.elems. (SSEs) defining this concept: EEEEHEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLU193)  (ARG198) E1
	  (ASP210)  (CYS216) E2
	  (VAL226)  (PRO231) E3
	  (GLY232)  (ARG236) E4
	  (SER240)  (VAL244) H5
	  (VAL248)  (ALA258) E6
	  (VAL266)  (SER276) E7
	  (ARG278)  (GLU282) E8
	  (MET284)  (PRO290) E9

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                             
E2      127.3°   E2                                                      
E3      -91.9°  109.6°   E3                                               
E4       82.2°  -76.0°  173.7°   E4                                        
H5       86.5°  -41.6°  108.5°   73.6°   H5                                 
E6      -81.2°  139.2°  -32.8°  142.8° -137.8°   E6                          
E7      136.6°  -53.5°  130.6°  -54.9°  -87.0°  128.4°   E7                   
E8      -48.3°   87.2°  -80.9°   96.8°   47.9°  -96.6°  133.9°   E8            
E9       49.5°  176.7°  -70.7°  103.5°  135.2°  -42.1°  128.9°  -89.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1k3za_ :   (CYS197)  (PRO290)   [view usage] : b.1.18.1 |Immunoglobulin-like beta-sandwich |E set domains |NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain |p65 subunit of NF-kappa B (NFKB), dimerization domain |Mouse (Mus musculus) [TaxId: 10090]
 d1ikna1 :   (LEU194)  (PRO290)   [view usage] : b.1.18.1 |Immunoglobulin-like beta-sandwich |E set domains |NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain |p65 subunit of NF-kappa B (NFKB), dimerization domain |Mouse (Mus musculus) [TaxId: 10090]
 d3jv6d_ :   (ALA225)  (TYR326)   [view usage] : b.1.18.1 |Immunoglobulin-like beta-sandwich |E set domains |NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d3jv6f_ :   (SER231)  (PRO327)   [view usage] : b.1.18.1 |Immunoglobulin-like beta-sandwich |E set domains |NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d1bfta_ :   (LEU194)  (LEU289)   [view usage] : b.1.18.1 |Immunoglobulin-like beta-sandwich |E set domains |NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain |p65 subunit of NF-kappa B (NFKB), dimerization domain |Mouse (Mus musculus) [TaxId: 10090]
 d3jv5d_ :   (SER231)  (PRO327)   [view usage] : b.1.18.0 |Immunoglobulin-like beta-sandwich |E set domains |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d1oy3c_ :   (LEU194)  (PRO290)   [view usage] : b.1.18.1 |Immunoglobulin-like beta-sandwich |E set domains |NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain |p65 subunit of NF-kappa B (NFKB), dimerization domain |Mouse (Mus musculus) [TaxId: 10090]
 d2v2ta2 :   (GLU280)  (PRO377)   [view usage] : b.1.18.0 |Immunoglobulin-like beta-sandwich |E set domains |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d3jv6b_ :   (SER231)  (PRO327)   [view usage] : b.1.18.1 |Immunoglobulin-like beta-sandwich |E set domains |NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d1my7b_ :   (GLU193)  (PRO290)   [view usage] : b.1.18.1 |Immunoglobulin-like beta-sandwich |E set domains |NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain |p65 subunit of NF-kappa B (NFKB), dimerization domain |Mouse (Mus musculus) [TaxId: 10090]
 d3jv5a_ :   (ASN227)  (TYR326)   [view usage] : b.1.18.0 |Immunoglobulin-like beta-sandwich |E set domains |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d1a3qa1 :   (LEU228)  (PRO327)   [view usage] : b.1.18.1 |Immunoglobulin-like beta-sandwich |E set domains |NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain |p52 subunit of NF-kappa B (NFKB) |Human (Homo sapiens) [TaxId: 9606]
 d1my5a_ :   (LEU194)  (LEU289)   [view usage] : b.1.18.1 |Immunoglobulin-like beta-sandwich |E set domains |NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain |p65 subunit of NF-kappa B (NFKB), dimerization domain |Mouse (Mus musculus) [TaxId: 10090]
 d1my7a_ :   (LEU194)  (LEU289)   [view usage] : b.1.18.1 |Immunoglobulin-like beta-sandwich |E set domains |NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain |p65 subunit of NF-kappa B (NFKB), dimerization domain |Mouse (Mus musculus) [TaxId: 10090]
 d1nfic1 :   (CYS197)  (PRO290)   [view usage] : b.1.18.1 |Immunoglobulin-like beta-sandwich |E set domains |NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain |p65 subunit of NF-kappa B (NFKB), dimerization domain |Human (Homo sapiens) [TaxId: 9606]
 d1nfia1 :   (CYS197)  (PRO290)   [view usage] : b.1.18.1 |Immunoglobulin-like beta-sandwich |E set domains |NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain |p65 subunit of NF-kappa B (NFKB), dimerization domain |Human (Homo sapiens) [TaxId: 9606]
 d1nfib_ :   (LEU251)  (PRO352)   [view usage] : b.1.18.1 |Immunoglobulin-like beta-sandwich |E set domains |NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain |p50 subunit of NF-kappa B transcription factor |Human (Homo sapiens) [TaxId: 9606]
 d1le5a1 :   (LEU194)  (PRO290)   [view usage] : b.1.18.1 |Immunoglobulin-like beta-sandwich |E set domains |NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain |p65 subunit of NF-kappa B (NFKB), dimerization domain |Mouse (Mus musculus) [TaxId: 10090]
 d1k3zb_ :   (THR191)  (PRO290)   [view usage] : b.1.18.1 |Immunoglobulin-like beta-sandwich |E set domains |NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain |p65 subunit of NF-kappa B (NFKB), dimerization domain |Mouse (Mus musculus) [TaxId: 10090]
 d3jv4f_ :   (LEU248)  (PRO349)   [view usage] : b.1.18.0 |Immunoglobulin-like beta-sandwich |E set domains |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d1oy3b_ :   (LEU194)  (PRO290)   [view usage] : b.1.18.1 |Immunoglobulin-like beta-sandwich |E set domains |NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain |p65 subunit of NF-kappa B (NFKB), dimerization domain |Mouse (Mus musculus) [TaxId: 10090]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   b.1