Protein Concepts Dictionary

Tableau information

Concept source:  d3jqme_  amino acid (a.a.) range (PRO11)(LEU128)

nSSEs in this Concept: 9

String of secondary struct.elems. (SSEs) defining this concept: EEHHHEEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (PRO11)   (THR17) E1
	   (PHE23)   (GLU33) E2
	   (THR35)   (GLY45) H3
	   (ASP51)   (LYS66) H4
	   (LYS66)   (ILE71) H5
	   (LEU73)   (PRO78) E6
	   (GLY81)   (GLU87) E7
	   (VAL95)  (THR103) E8
	  (VAL109)  (LEU128) H9

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                             
E2     -148.3°   E2                                                      
H3      -45.2° -116.7°   H3                                               
H4      -70.2°  141.2°  -95.7°   H4                                        
H5      133.6°   73.0°  160.8°  -70.2°   H5                                 
E6      -43.7° -112.5°  -11.0° -102.9° -171.6°   E6                          
E7      130.9°  -19.8° -112.3°  152.0°   82.4° -104.9°   E7                   
E8      -43.3°  166.9°   66.4°  -30.3° -100.4°   72.8°  173.2°   E8            
H9     -133.5°  -25.7°   92.9°  146.9°   92.7°  -91.0°  -36.0°  148.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2eeya_ :    (ALA13)  (CYS132)   [view usage] : d.58.21.0 |Ferredoxin-like |Molybdenum cofactor biosynthesis protein C, MoaC |automated matches |automated matches |Geobacillus kaustophilus [TaxId: 235909]
 d2ohdb_ :     (ALA4)  (VAL119)   [view usage] : d.58.21.0 |Ferredoxin-like |Molybdenum cofactor biosynthesis protein C, MoaC |automated matches |automated matches |Sulfolobus tokodaii [TaxId: 273063]
 d3jqme_ :    (PRO11)  (LEU128)   [view usage] : d.58.21.0 |Ferredoxin-like |Molybdenum cofactor biosynthesis protein C, MoaC |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
 d2ohdc_ :     (GLU3)  (VAL119)   [view usage] : d.58.21.0 |Ferredoxin-like |Molybdenum cofactor biosynthesis protein C, MoaC |automated matches |automated matches |Sulfolobus tokodaii [TaxId: 273063]
 d3jqjh_ :    (PRO11)  (LEU128)   [view usage] : d.58.21.0 |Ferredoxin-like |Molybdenum cofactor biosynthesis protein C, MoaC |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  d.58