Tableau information
Concept source: d1poxa2 amino acid (a.a.) range (ALA13)(GLN110)
nSSEs in this Concept: 9
String of secondary struct.elems. (SSEs) defining this concept: HEHEHEHHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ALA13) (GLY25) H1
(ASP27) (GLY31) E2
(GLY34) (GLU47) H3
(ILE51) (ARG57) E4
(GLU59) (ASP69) H5
(GLY77) (SER82) E6
(PRO85) (MET91) H7
(MET91) (HIS101) H8
(VAL104) (GLN110) E9
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 128.8° E2
H3 -60.0° -156.9° H3
E4 101.5° -28.9° -141.4° E4
H5 38.3° -154.0° 47.8° 136.0° H5
E6 -159.0° -31.4° -134.2° -57.7° -160.9° E6
H7 19.1° 112.4° 78.9° 87.8° -48.5° 143.9° H7
H8 39.4° -133.9° 67.9° 121.1° -20.2° -150.4° -40.1° H8
E9 -171.5° -44.3° 124.0° -70.7° 150.2° -13.1° -156.4° -147.6°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.3° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1v5fa2 : (ASN7) (SER105) [view usage] : c.36.1.0 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |automated matches |automated matches |Aerococcus viridans [TaxId: 1377]
d2vk1a1 : (THR5) (GLY100) [view usage] : c.36.1.0 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2w93a1 : (THR5) (GLY100) [view usage] : c.36.1.0 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1v5ea2 : (ASN7) (SER105) [view usage] : c.36.1.5 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |Pyruvate oxidase and decarboxylase Pyr module |Pyruvate oxidase |Aerococcus viridans [TaxId: 1377]
d1poxa2 : (ALA13) (GLN110) [view usage] : c.36.1.5 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |Pyruvate oxidase and decarboxylase Pyr module |Pyruvate oxidase |Lactobacillus plantarum [TaxId: 1590]
d1qpba2 : (THR5) (GLY100) [view usage] : c.36.1.5 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |Pyruvate oxidase and decarboxylase Pyr module |Pyruvate decarboxylase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2vjya1 : (THR5) (GLY100) [view usage] : c.36.1.0 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |automated matches |automated matches |Milk yeast (Kluyveromyces lactis) [TaxId: 28985]
d1powa2 : (LEU12) (GLY109) [view usage] : c.36.1.5 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |Pyruvate oxidase and decarboxylase Pyr module |Pyruvate oxidase |Lactobacillus plantarum [TaxId: 1590]
d1ovma2 : (VAL7) (GLY101) [view usage] : c.36.1.5 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |Pyruvate oxidase and decarboxylase Pyr module |Indole-3-pyruvate decarboxylase |Enterobacter cloacae [TaxId: 550]
d1b0pa1 : (ASP9) (THR112) [view usage] : c.36.1.8 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |PFOR Pyr module |Pyruvate-ferredoxin oxidoreductase, PFOR, domain I |Desulfovibrio africanus [TaxId: 873]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.36