Protein Concepts Dictionary

Tableau information

Concept source:  d4a2ea2  amino acid (a.a.) range (VAL166)(TYR301)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: EEEEEEEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (VAL166)  (HIS174) E1
	  (ALA206)  (THR211) E2
	  (LYS214)  (CYS225) E3
	  (ASN228)  (ASP234) E4
	  (GLY235)  (ILE241) E5
	  (LYS249)  (ASP254) E6
	  (ASP254)  (ALA260) E7
	  (ALA261)  (ASP271) E8
	  (ASP275)  (ASN284) E9
	  (ASN295)  (TYR301) E10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                    
E2     -164.0°   E2                                                             
E3      -28.9°  165.7°   E3                                                      
E4      126.9°  -38.0°  155.7°   E4                                               
E5     -108.3°   87.7°  -80.1°  123.5°   E5                                        
E6       53.5° -110.5°   81.5°  -74.7°  161.7°   E6                                 
E7      -55.0°  139.8°  -35.0°  150.8°   57.6° -105.8°   E7                          
E8      125.5°  -38.8°  154.0°   -5.4°  125.8°  -72.5° -155.8°   E8                   
E9      -53.0°  139.0°  -27.0°  164.2°  -63.4°   99.7°  -44.8°  158.7°   E9            
E10     151.0°  -20.6°  167.0°  -29.6°   94.4° -103.4°  132.7°  -33.3°  155.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4a2ea2 :   (VAL166)  (TYR301)   [view usage] : b.6.1.0 |Cupredoxin-like |Cupredoxins |automated matches |automated matches |Coriolopsis gallica [TaxId: 76126]
 d1a65a2 :   (ILE145)  (TYR284)   [view usage] : b.6.1.3 |Cupredoxin-like |Cupredoxins |Multidomain cupredoxins |Laccase |Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
 d1gyca2 :   (VAL145)  (TYR281)   [view usage] : b.6.1.3 |Cupredoxin-like |Cupredoxins |Multidomain cupredoxins |Laccase |Trametes versicolor, laccase 2 [TaxId: 5325]
 d2xyba2 :   (VAL145)  (TYR281)   [view usage] : b.6.1.0 |Cupredoxin-like |Cupredoxins |automated matches |automated matches |Pycnoporus cinnabarinus [TaxId: 5643]
 d2hrga2 :   (VAL145)  (TYR280)   [view usage] : b.6.1.0 |Cupredoxin-like |Cupredoxins |automated matches |automated matches |Funalia trogii [TaxId: 76130]
 d3fpxa2 :   (VAL145)  (TYR281)   [view usage] : b.6.1.0 |Cupredoxin-like |Cupredoxins |automated matches |automated matches |Trametes hirsuta [TaxId: 5327]
 d2qt6a2 :   (VAL145)  (TYR281)   [view usage] : b.6.1.0 |Cupredoxin-like |Cupredoxins |automated matches |automated matches |Lentinus tigrinus [TaxId: 5365]
 d1kyaa2 :   (VAL145)  (TYR281)   [view usage] : b.6.1.3 |Cupredoxin-like |Cupredoxins |Multidomain cupredoxins |Laccase |Trametes versicolor, laccase 1 [TaxId: 5325]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   b.6