Protein Concepts Dictionary

Tableau information

Concept source:  d2gb2a_  amino acid (a.a.) range (LYS2)(GLU105)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: EEEEEHEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (LYS2)    (SER7) E1
	   (ILE21)   (ALA26) E2
	   (PRO33)   (VAL37) E3
	   (ASP41)   (ASN47) E4
	   (MET51)   (VAL55) E5
	   (VAL58)   (GLY63) H6
	   (PRO70)   (LYS74) E7
	   (ALA77)   (THR83) E8
	   (GLY86)   (CYS92) E9
	   (MET98)  (GLU105) E10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                    
E2      -64.9°   E2                                                             
E3      104.1° -168.9°   E3                                                      
E4      -49.8°  -15.1°  153.8°   E4                                               
E5     -141.8°  146.7°  -43.0°  159.0°   E5                                        
H6      -96.0° -156.5°   16.7° -143.2°   56.7°   H6                                 
E7       55.3°  -61.8°  113.0°  -55.3°  143.4°   96.4°   E7                          
E8      149.2°  144.8°  -46.0°  159.6°   10.6°   57.1° -134.8°   E8                   
E9      -43.1°  -24.4°  145.1°  -12.4°  153.8° -139.1°  -62.7°  160.1°   E9            
E10     119.1°  170.3°  -17.8°  165.9°  -35.1°   23.4°  112.2°  -33.9°  161.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2idqa_ :     (LYS2)  (VAL104)   [view usage] : b.6.1.1 |Cupredoxin-like |Cupredoxins |Plastocyanin/azurin-like |Amicyanin |Paracoccus denitrificans [TaxId: 266]
 d1sf3a_ :     (LYS2)  (GLU105)   [view usage] : b.6.1.1 |Cupredoxin-like |Cupredoxins |Plastocyanin/azurin-like |Amicyanin |Paracoccus denitrificans [TaxId: 266]
 d3ryma_ :     (LYS2)  (GLU105)   [view usage] : b.6.1.1 |Cupredoxin-like |Cupredoxins |Plastocyanin/azurin-like |Amicyanin |Paracoccus denitrificans [TaxId: 266]
 d3plya_ :     (LYS2)  (GLU105)   [view usage] : b.6.1.1 |Cupredoxin-like |Cupredoxins |Plastocyanin/azurin-like |Amicyanin |Paracoccus denitrificans [TaxId: 266]
 d1sfda_ :     (LYS2)  (GLU105)   [view usage] : b.6.1.1 |Cupredoxin-like |Cupredoxins |Plastocyanin/azurin-like |Amicyanin |Paracoccus denitrificans [TaxId: 266]
 d3ie9a_ :     (LYS2)  (GLU105)   [view usage] : b.6.1.1 |Cupredoxin-like |Cupredoxins |Plastocyanin/azurin-like |Amicyanin |Paracoccus denitrificans [TaxId: 266]
 d4p5ra_ :     (LYS2)  (GLU105)   [view usage] : b.6.1.1 |Cupredoxin-like |Cupredoxins |Plastocyanin/azurin-like |Amicyanin |Paracoccus denitrificans [TaxId: 266]
 d2gb2a_ :     (LYS2)  (GLU105)   [view usage] : b.6.1.1 |Cupredoxin-like |Cupredoxins |Plastocyanin/azurin-like |Amicyanin |Paracoccus denitrificans [TaxId: 266]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   b.6