Tableau information
Concept source: d3gvva_ amino acid (a.a.) range (LEU234)(GLN366)
nSSEs in this Concept: 10
String of secondary struct.elems. (SSEs) defining this concept: HEHEHEHHEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LEU234) (GLY252) H1
(GLY252) (LYS263) E2
(LEU269) (ALA275) H3
(GLU278) (ASP283) E4
(PRO288) (CYS294) H5
(THR300) (ASP306) E6
(ASP306) (ALA312) H7
(SER313) (PHE328) H8
(ARG332) (ASN336) E9
(PRO347) (GLN366) H10
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 164.5° E2
H3 -16.2° 171.9° H3
E4 142.5° -23.2° 151.1° E4
H5 -66.2° 129.3° -52.6° 148.4° H5
E6 131.8° -34.2° 140.2° -11.0° 154.7° E6
H7 85.8° 78.9° -101.0° 61.5° -150.1° 54.5° H7
H8 -80.9° 113.1° -72.0° 136.2° -27.6° 147.2° -142.5° H8
E9 110.6° -59.5° 113.1° -39.4° 136.2° -30.5° -62.1° 155.1° E9
H10 -75.2° 110.1° -78.0° 125.5° -63.8° 132.0° 100.2° -42.5° 159.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±11.8° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2ejaa_ : (TYR216) (SER334) [view usage] : c.1.22.0 |TIM beta/alpha-barrel |UROD/MetE-like |automated matches |automated matches |Aquifex aeolicus [TaxId: 63363]
d3hn3b3 : (ASN419) (LYS576) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |beta-Glucuronidase, domain 3 |Human (Homo sapiens) [TaxId: 9606]
d4im4a_ : (LYS89) (ASN252) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Clostridium thermocellum [TaxId: 1515]
d2xpka2 : (GLU235) (TYR387) [view usage] : c.1.8.10 |TIM beta/alpha-barrel |(Trans)glycosidases |alpha-D-glucuronidase/Hyaluronidase catalytic domain |automated matches |Clostridium perfringens [TaxId: 1502]
d1wbhb_ : (PRO77) (LEU175) [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |KDPG aldolase |Escherichia coli [TaxId: 562]
d4wsha_ : (LEU225) (TYR353) [view usage] : c.1.22.1 |TIM beta/alpha-barrel |UROD/MetE-like |Uroporphyrinogen decarboxylase, UROD |automated matches |Pseudomonas aeruginosa [TaxId: 208964]
d3gvva_ : (LEU234) (GLN366) [view usage] : c.1.22.1 |TIM beta/alpha-barrel |UROD/MetE-like |Uroporphyrinogen decarboxylase, UROD |Uroporphyrinogen decarboxylase, UROD |Human (Homo sapiens) [TaxId: 9606]
d1bhga3 : (HIS440) (LYS576) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |beta-Glucuronidase, domain 3 |Human (Homo sapiens) [TaxId: 9606]
d2ejab_ : (TYR216) (PHE335) [view usage] : c.1.22.0 |TIM beta/alpha-barrel |UROD/MetE-like |automated matches |automated matches |Aquifex aeolicus [TaxId: 63363]
d3s9yb_ : (GLY115) (ILE252) [view usage] : c.1.2.3 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Decarboxylase |automated matches |Plasmodium falciparum [TaxId: 36329]
d4jn6a1 : (GLU67) (GLY190) [view usage] : c.1.10.0 |TIM beta/alpha-barrel |Aldolase |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
d2q6za_ : (LEU234) (LYS359) [view usage] : c.1.22.1 |TIM beta/alpha-barrel |UROD/MetE-like |Uroporphyrinogen decarboxylase, UROD |Uroporphyrinogen decarboxylase, UROD |Human (Homo sapiens) [TaxId: 9606]
d3i4ka2 : (LEU214) (THR321) [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Corynebacterium glutamicum [TaxId: 1718]
d1mxsa_ : (ASP88) (LEU187) [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |KDPG aldolase |Pseudomonas putida [TaxId: 303]
d2yckx_ : (ARG26) (GLY152) [view usage] : c.1.21.2 |TIM beta/alpha-barrel |Dihydropteroate synthetase-like |Methyltetrahydrofolate-utiluzing methyltransferases |automated matches |Carboxydothermus hydrogenoformans [TaxId: 246194]
d2f84a1 : (ILE116) (PRO257) [view usage] : c.1.2.3 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Decarboxylase |Protozoan orotidine monophosphate decarboxylase |Plasmodium falciparum (isolate 3D7) (Plasmodium falciparum 3D7) [TaxId: 36329]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1