Protein Concepts Dictionary

Tableau information

Concept source:  d1k58a_  amino acid (a.a.) range (SER4)(SER118)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: HHEHEEEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (SER4)   (TYR14) H1
	   (ASP23)   (GLY34) H2
	   (ASP41)   (ILE46) E3
	   (LYS50)   (ILE56) H4
	   (LYS60)   (ARG66) E5
	   (ASN68)   (SER74) E6
	   (GLN77)   (LEU83) E7
	   (PRO91)   (GLY99) E8
	  (ARG101)  (ALA106) E9
	  (VAL113)  (SER118) E10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                    
H2      153.0°   H2                                                             
E3      -96.0°   98.4°   E3                                                      
H4      128.3°  -68.9°  105.8°   H4                                               
E5       95.3°  -84.2°  148.6°  -45.8°   E5                                        
E6      -47.4°  136.2°   49.6°  139.9°  139.3°   E6                                 
E7       83.5°  -77.9°  168.3°  -83.3°  -42.7° -126.7°   E7                          
E8      -88.0°  117.3°  -39.9°   80.6°  111.5°  -60.4°  151.3°   E8                   
E9      158.6°  -18.2° -104.7°  -50.9°  -69.8°  150.6°   75.2°  111.3°   E9            
E10      44.2° -137.5°  121.3°   85.1°   54.3°  -85.1°  -65.9°   89.1°  124.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.8°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4ahea_ :     (SER4)  (GLN117)   [view usage] : d.5.1.1 |RNase A-like |RNase A-like |Ribonuclease A-like |Angiogenin |Human (Homo sapiens) [TaxId: 9606]
 d3ljea_ :     (PRO3)  (GLY121)   [view usage] : d.5.1.0 |RNase A-like |RNase A-like |automated matches |automated matches |Zebrafish (Danio rerio) [TaxId: 7955]
 d1agia_ :     (ARG6)  (SER119)   [view usage] : d.5.1.1 |RNase A-like |RNase A-like |Ribonuclease A-like |Angiogenin |Cow (Bos taurus) [TaxId: 9913]
 d1un3a_ :     (SER4)  (GLN117)   [view usage] : d.5.1.1 |RNase A-like |RNase A-like |Ribonuclease A-like |Angiogenin |Human (Homo sapiens) [TaxId: 9606]
 d3zbva_ :     (SER4)  (SER117)   [view usage] : d.5.1.1 |RNase A-like |RNase A-like |Ribonuclease A-like |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d1k58a_ :     (SER4)  (SER118)   [view usage] : d.5.1.1 |RNase A-like |RNase A-like |Ribonuclease A-like |Angiogenin |Human (Homo sapiens) [TaxId: 9606]
 d2hkya_ :     (THR6)  (ARG126)   [view usage] : d.5.1.0 |RNase A-like |RNase A-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2vq9a_ :     (ILE5)  (VAL127)   [view usage] : d.5.1.0 |RNase A-like |RNase A-like |automated matches |automated matches |Zebrafish (Danio rerio) [TaxId: 7955]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   d.5