Protein Concepts Dictionary

Tableau information

Concept source:  d1mpba_  amino acid (a.a.) range (ASN185)(LEU311)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: HHEHEEEHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ASN185)  (LYS202) H1
	  (ASP209)  (GLY220) H2
	  (ALA223)  (ASN227) E3
	  (GLY228)  (LYS239) H4
	  (ASN241)  (LYS251) E5
	  (GLY252)  (LEU262) E6
	  (SER263)  (ASN267) E7
	  (LYS273)  (LEU285) H8
	  (THR286)  (LYS297) H9
	  (LYS305)  (LEU311) H10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                    
H2       61.5°   H2                                                             
E3     -137.6° -135.1°   E3                                                      
H4       25.1°  -38.6°  138.6°   H4                                               
E5      124.2°  124.5°  -81.6°  139.0°   E5                                        
E6      -99.0° -110.4°   41.7°  -97.3°  120.9°   E6                                 
E7     -120.9° -139.2°   17.3° -127.1°   89.4°  -31.5°   E7                          
H8       56.3°   23.0° -155.6°   41.9° -106.7°  131.7°  162.0°   H8                   
H9      -25.1°  -86.5°  120.5°  -49.5°  110.5°   91.6°  103.4°  -78.8°   H9            
H10      21.7°  -45.2°  157.7°   22.1° -117.1°  116.4°  142.1°   35.1°  -44.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4jkmd_ :   (ASN194)  (LEU320)   [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |D-maltodextrin-binding protein, MBP |Escherichia coli [TaxId: 562]
 d1svxb_ :   (ASN185)  (LEU311)   [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |D-maltodextrin-binding protein, MBP |Escherichia coli [TaxId: 562]
 d1mpba_ :   (ASN185)  (LEU311)   [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |D-maltodextrin-binding protein, MBP |Escherichia coli [TaxId: 562]
 d1r6za2 :   (ASN184)  (LEU310)   [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |D-maltodextrin-binding protein, MBP |Escherichia coli [TaxId: 562]
 d1r6zz2 :   (ASN184)  (LEU310)   [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |D-maltodextrin-binding protein, MBP |Escherichia coli [TaxId: 562]
 d3uorb_ :   (ALA219)  (ASP353)   [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Xanthomonas axonopodis [TaxId: 190486]
 d3puve_ :   (ALA186)  (LEU311)   [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |automated matches |Escherichia coli K-12 [TaxId: 83333]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.94