Protein Concepts Dictionary

Tableau information

Concept source:  d2prra1  amino acid (a.a.) range (PRO20)(MSE189)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: HHHHHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (PRO20)   (GLY35) H1
	   (PRO38)   (ARG47) H2
	   (ARG47)   (LEU63) H3
	   (THR69)   (GLN85) H4
	   (CYS86)  (TYR100) H5
	  (VAL106)  (VAL112) H6
	  (PRO121)  (ALA136) H7
	  (GLU142)  (GLY152) H8
	  (THR154)  (ILE178) H9
	  (ASN183)  (MSE189) H10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                    
H2     -173.2°   H2                                                             
H3       47.4°  138.4°   H3                                                      
H4     -105.1°   68.5°  129.3°   H4                                               
H5       51.5° -135.1°  -33.9° -156.2°   H5                                        
H6     -120.5°   56.1°  110.7°  -39.2°  142.9°   H6                                 
H7     -147.4°   25.9°  149.3°  -42.7°  161.0°  -41.5°   H7                          
H8       43.9° -140.6°  -53.0°  141.5°  -24.9°  161.7° -156.5°   H8                   
H9     -101.4°   72.4° -148.5°  -43.6°  135.6°  -79.2°  -54.3°  110.7°   H9            
H10      34.9° -149.1°   17.9° -113.9°   45.4° -104.8° -146.3°   57.0° -132.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2prrj_ :    (ASP21)  (MSE189)   [view usage] : a.152.1.3 |AhpD-like |AhpD-like |Atu0492-like |Uncharacterized protein Reut_A2532 |Ralstonia eutropha [TaxId: 106590]
 d2prra1 :    (PRO20)  (MSE189)   [view usage] : a.152.1.3 |AhpD-like |AhpD-like |Atu0492-like |Uncharacterized protein Reut_A2532 |Ralstonia eutropha [TaxId: 106590]
 d2pfxb_ :    (PRO19)  (GLN188)   [view usage] : a.152.1.3 |AhpD-like |AhpD-like |Atu0492-like |Uncharacterized protein TM1040_2465 |Silicibacter sp. tm1040 [TaxId: 292414]
 d2prrd_ :    (PRO20)  (MSE189)   [view usage] : a.152.1.3 |AhpD-like |AhpD-like |Atu0492-like |Uncharacterized protein Reut_A2532 |Ralstonia eutropha [TaxId: 106590]
 d2oyoa1 :    (GLU25)  (GLN193)   [view usage] : a.152.1.3 |AhpD-like |AhpD-like |Atu0492-like |Uncharacterized protein Dgeo_1446 |Deinococcus geothermalis [TaxId: 68909]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 a.152