Protein Concepts Dictionary

Tableau information

Concept source:  d4coqb_  amino acid (a.a.) range (SER72)(MET164)

nSSEs in this Concept: 11

String of secondary struct.elems. (SSEs) defining this concept: EEEEEEEEEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (SER72)   (SER77) E1
	   (TYR81)   (GLY86) E2
	   (ILE89)   (GLY94) E3
	   (ARG96)  (VAL100) E4
	  (LYS104)  (GLN110) E5
	  (GLN110)  (PRO116) E6
	  (GLU118)  (ASN122) E7
	  (GLY123)  (PRO127) E8
	  (PRO127)  (LYS137) E9
	  (ASN140)  (VAL150) E10
	  (ASN154)  (MET164) H11

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                           
E2      -97.4°   E2                                                                    
E3       95.2°  142.2°   E3                                                             
E4     -165.3°  -74.5°  -98.6°   E4                                                      
E5      -32.3°  -72.6° -127.4°  133.4°   E5                                               
E6     -102.4°  -38.5°  162.2°   63.6°   70.1°   E6                                        
E7     -146.1°  -81.0°  106.8°   22.2° -119.4°  -56.2°   E7                                 
E8      -22.9° -118.4°   83.0°  155.7°  -47.1° -112.4°  134.4°   E8                          
E9       96.8°  118.6°  -24.1°  -97.9°  126.7°  151.6°  113.8°  -93.2°   E9                   
E10     -78.4°  -79.7°  137.9°   88.0°  -54.4°  -45.6°  -68.0°   75.3°  161.7°   E10           
H11      37.8°  -69.7°  101.3° -141.8°  -44.5°  -94.4° -149.6°  -59.8°   87.9°  -98.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1koqb_ :    (GLY45)  (MET144)   [view usage] : b.74.1.1 |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Neisseria gonorrhoeae [TaxId: 485]
 d4c3ta_ :    (SER72)  (MET164)   [view usage] : b.74.1.0 |Carbonic anhydrase |Carbonic anhydrase |automated matches |automated matches |Thermovibrio ammonificans [TaxId: 228745]
 d1y7wa_ :    (GLY72)  (ASP181)   [view usage] : b.74.1.0 |Carbonic anhydrase |Carbonic anhydrase |automated matches |automated matches |Dunaliella salina [TaxId: 3046]
 d1kopa_ :    (PRO48)  (MET144)   [view usage] : b.74.1.1 |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Neisseria gonorrhoeae [TaxId: 485]
 d3q31a_ :    (SER81)  (PHE175)   [view usage] : b.74.1.0 |Carbonic anhydrase |Carbonic anhydrase |automated matches |automated matches |Fungus (Aspergillus oryzae) [TaxId: 5062]
 d4coqb_ :    (SER72)  (MET164)   [view usage] : b.74.1.0 |Carbonic anhydrase |Carbonic anhydrase |automated matches |automated matches |Thermovibrio ammonificans [TaxId: 648996]
 d1koqa_ :    (LYS46)  (MET144)   [view usage] : b.74.1.1 |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Neisseria gonorrhoeae [TaxId: 485]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.74