Protein Concepts Dictionary

Tableau information

Concept source:  d1op2a_  amino acid (a.a.) range (LEU30)(ILE185)

nSSEs in this Concept: 11

String of secondary struct.elems. (SSEs) defining this concept: EEEEEEEEEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (LEU30)   (THR36) E1
	   (CYS42)   (ASN48) E2
	   (GLU50)   (THR54) E3
	   (ASN63)   (GLY69) E4
	   (ASP79)   (PRO85) E5
	   (LYS86)   (CYS91) E6
	  (ASP102)  (LYS107) E7
	  (SER134)  (GLY140) E8
	  (VAL154)  (ASP164) E9
	  (ALA166)  (TYR172) H10
	  (ARG179)  (ILE185) E11

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                           
E2      131.1°   E2                                                                    
E3      -78.3°  145.2°   E3                                                             
E4      143.3°  -62.0°  107.6°   E4                                                      
E5      -63.7°   98.8°  -76.6°  152.9°   E5                                               
E6     -108.5°  100.2°  -46.7°  100.3°  -62.3°   E6                                        
E7       90.1°  -49.7°  164.9°  -76.0°  107.2°  148.2°   E7                                 
E8      -30.1°  114.8°  -99.8°  115.9°  -89.0° -138.1°   66.0°   E8                          
E9      119.8°  -81.2°   66.0°  -94.6°   61.9°   19.3° -128.9°  149.4°   E9                   
H10     -23.4° -151.5°   54.9°  143.1°  -61.5°  -88.8°  113.3°  -49.5°  103.9°   H10           
E11    -101.0°  114.4°  -68.0°   52.6° -143.8°  -96.3°  105.3°  -89.9°  107.7°   91.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.3°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4q7ya_ :    (TYR29)  (SER185)   [view usage] : b.47.1.0 |Trypsin-like serine proteases |Trypsin-like serine proteases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1v2qt_ :    (GLN30)  (SER178)   [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Trypsin(ogen) |Cow (Bos taurus) [TaxId: 9913]
 d3tk9a_ :    (MET30)  (ASP185)   [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1ltoa_ :    (TYR37)  (GLY184)   [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Alpha tryptase I |Human (Homo sapiens) [TaxId: 9606]
 d1iaua_ :    (TYR29)  (ASP184)   [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Granzyme B |Human (Homo sapiens) [TaxId: 9606]
 d1ym0a_ :    (GLN30)  (THR184)   [view usage] : b.47.1.0 |Trypsin-like serine proteases |Trypsin-like serine proteases |automated matches |automated matches |Worm (Eisenia fetida) [TaxId: 6396]
 d3fzza_ :    (MET35)  (SER193)   [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d4gawb_ :    (PHE32)  (ASP185)   [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1v2ot_ :    (GLN30)  (THR177)   [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Trypsin(ogen) |Cow (Bos taurus) [TaxId: 9913]
 d1tgna_ :    (GLN30)  (TYR184)   [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Trypsin(ogen) |Cow (Bos taurus) [TaxId: 9913]
 d1j15a_ :    (GLN30)  (ASP178)   [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Trypsin(ogen) |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d1gvla_ :    (GLN30)  (ASP185)   [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Kallikrein 6 |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.47