Protein Concepts Dictionary

Tableau information

Concept source:  d1b6ta_  amino acid (a.a.) range (LYS3)(GLN139)

nSSEs in this Concept: 11

String of secondary struct.elems. (SSEs) defining this concept: EHEHEHEHEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (LYS3)    (PRO8) E1
	   (ASN16)   (MET28) H2
	   (ASP30)   (SER39) E3
	   (THR47)   (THR59) H4
	   (ASN64)   (ASP72) E5
	   (LEU73)   (HIS82) H6
	   (THR84)   (GLY89) E7
	   (PHE96)  (LEU109) H8
	  (GLU114)  (MET119) E9
	  (SER121)  (ILE127) H10
	  (SER128)  (GLN139) H11

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                           
H2      167.2°   H2                                                                    
E3      -23.5°  144.9°   E3                                                             
H4      133.5°  -58.1°  156.9°   H4                                                      
E5      -51.0°  116.3°  -30.3°  165.0°   E5                                               
H6      154.3°  -33.1°  144.4°  -51.9°  132.3°   H6                                        
E7      -46.7°  143.4°  -70.2°   87.0°  -94.4°  131.3°   E7                                 
H8      125.3°  -46.2°  102.3°  -99.7°   81.6°  -50.9°  168.6°   H8                          
E9      -65.6°  126.1°  -88.9°   68.0° -115.2°  110.1°  -21.2°  157.8°   E9                   
H10      39.4° -127.9°   19.0°  166.5°  -11.7°  140.6°  -83.9°   91.0° -104.3°   H10           
H11     -40.6° -149.0°  -54.0°  107.4°  -83.9°  115.9°   46.2°  122.4°   50.4°   73.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.2°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3nbkd_ :     (HIS0)  (LEU156)   [view usage] : c.26.1.0 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
 d3l92a_ :     (MET1)  (GLY139)   [view usage] : c.26.1.3 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Adenylyltransferase |automated matches |Yersinia pestis [TaxId: 214092]
 d3otwb_ :     (LYS3)  (SER155)   [view usage] : c.26.1.0 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |automated matches |automated matches |Helicobacter pylori [TaxId: 85962]
 d4nahb_ :     (HIS3)  (LYS160)   [view usage] : c.26.1.0 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |automated matches |automated matches |Staphylococcus aureus [TaxId: 196620]
 d3nbkc_ :     (MET1)  (ASN157)   [view usage] : c.26.1.0 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
 d4r0na_ :     (THR2)  (ASN157)   [view usage] : c.26.1.3 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Adenylyltransferase |Phosphopantetheine adenylyltransferase |Mycobacterium tuberculosis [TaxId: 1010836]
 d3l93a_ :    (ASN-1)  (GLY139)   [view usage] : c.26.1.3 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Adenylyltransferase |automated matches |Yersinia pestis [TaxId: 214092]
 d3otwa_ :     (LYS3)  (ALA157)   [view usage] : c.26.1.0 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |automated matches |automated matches |Helicobacter pylori [TaxId: 85962]
 d3k9wa_ :     (MET1)  (GLY138)   [view usage] : c.26.1.0 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |automated matches |automated matches |Burkholderia pseudomallei [TaxId: 320372]
 d1gn8a_ :     (LYS3)  (GLN139)   [view usage] : c.26.1.3 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Adenylyltransferase |Phosphopantetheine adenylyltransferase |Escherichia coli [TaxId: 562]
 d3nbka_ :     (GLY3)  (ASN157)   [view usage] : c.26.1.0 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
 d1o6ba_ :     (SER3)  (ASP139)   [view usage] : c.26.1.3 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Adenylyltransferase |Phosphopantetheine adenylyltransferase |Bacillus subtilis [TaxId: 1423]
 d1m8fa_ :     (MET4)  (ASP141)   [view usage] : c.26.1.3 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Adenylyltransferase |Nicotinamide mononucleotide (NMN) adenylyltransferase |Methanobacterium thermoautotrophicum [TaxId: 145262]
 d1tfua_ :     (MET1)  (LEU156)   [view usage] : c.26.1.3 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Adenylyltransferase |Phosphopantetheine adenylyltransferase |Mycobacterium tuberculosis [TaxId: 1773]
 d1h1ta_ :     (GLN2)  (GLN139)   [view usage] : c.26.1.3 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Adenylyltransferase |Phosphopantetheine adenylyltransferase |Escherichia coli [TaxId: 562]
 d1b6ta_ :     (LYS3)  (GLN139)   [view usage] : c.26.1.3 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Adenylyltransferase |Phosphopantetheine adenylyltransferase |Escherichia coli [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.26