Protein Concepts Dictionary

Tableau information

Concept source:  d1kufa_  amino acid (a.a.) range (PRO6)(GLY151)

nSSEs in this Concept: 11

String of secondary struct.elems. (SSEs) defining this concept: EHHEEHHEEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (PRO6)   (ASP17) E1
	   (HIS18)   (SER25) H2
	   (ASN27)   (CYS46) H3
	   (ASN50)   (LEU55) E4
	   (LEU57)   (TRP61) E5
	   (ALA73)   (ARG86) H6
	   (VAL87)   (LYS92) H7
	   (HIS96)  (ASP102) E8
	  (ILE110)  (TYR114) E9
	  (SER124)  (LYS129) E10
	  (LYS134)  (GLY151) H11

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                           
H2      -73.0°   H2                                                                    
H3      154.6°  112.6°   H3                                                             
E4      -25.9°  -75.5°  171.9°   E4                                                      
E5      -17.3°  -79.0°  137.2°  -42.6°   E5                                               
H6      102.1° -101.5° -100.9°   76.4°  117.4°   H6                                        
H7      121.5°   72.0°  -83.0°   99.8°  137.9°  -44.0°   H7                                 
E8      -35.7°   50.7°  128.0°  -56.9°  -31.4°  128.9°  120.9°   E8                          
E9      125.6° -151.7°  -61.1°  111.7°  125.5°  -56.6°  -79.7°  156.4°   E9                   
E10     -48.4°   38.8°  119.9°  -66.4°  -45.7°  130.1°  110.7°  -14.3°  169.5°   E10           
H11     120.7° -166.2°  -56.0°  116.0°  114.5°  -75.3°  -97.6°  141.2°  -19.4°  151.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4j4mb_ :     (PRO6)  (GLY151)   [view usage] : d.92.1.0 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |automated matches |automated matches |Protobothrops mucrosquamatus [TaxId: 103944]
 d1kufa_ :     (PRO6)  (GLY151)   [view usage] : d.92.1.9 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Reprolysin-like |Snake venom metalloprotease |Taiwan habu (Trimeresurus mucrosquamatus), atrolysin E [TaxId: 103944]
 d1quaa_ :     (GLN5)  (GLY149)   [view usage] : d.92.1.9 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Reprolysin-like |Snake venom metalloprotease |Chinese five-pace snake (Agkistrodon acutus), acutolysin C [TaxId: 36307]
 d1iaga_ :     (PRO4)  (GLY149)   [view usage] : d.92.1.9 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Reprolysin-like |Snake venom metalloprotease |Eastern diamondback rattlesnake (Crotalus adamanteus), adamalysin II [TaxId: 8729]
 d1nd1a_ :     (SER4)  (GLY149)   [view usage] : d.92.1.9 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Reprolysin-like |Snake venom metalloprotease |Terciopelo (Bothrops asper), bap1 [TaxId: 8722]
 d2aigp_ :     (GLN5)  (GLY149)   [view usage] : d.92.1.9 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Reprolysin-like |Snake venom metalloprotease |Eastern diamondback rattlesnake (Crotalus adamanteus), adamalysin II [TaxId: 8729]
 d2w12a_ :     (SER4)  (GLY149)   [view usage] : d.92.1.9 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Reprolysin-like |Snake venom metalloprotease |Terciopelo (Bothrops asper), bap1 [TaxId: 8722]
 d1dtha_ :     (GLN1)  (GLY149)   [view usage] : d.92.1.9 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Reprolysin-like |Snake venom metalloprotease |Western diamonback rattlesnake (Crotalus atrox), atrolysin C [TaxId: 8730]
 d1wnia_ :     (PRO4)  (GLY149)   [view usage] : d.92.1.9 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Reprolysin-like |Snake venom metalloprotease |Habu (Trimeresurus flavoviridis), Trimerelysin II [TaxId: 88087]
 d1kuga_ :     (PRO6)  (GLY151)   [view usage] : d.92.1.9 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Reprolysin-like |Snake venom metalloprotease |Taiwan habu (Trimeresurus mucrosquamatus), atrolysin E [TaxId: 103944]
 d1yp1a_ :     (GLN5)  (GLY149)   [view usage] : d.92.1.9 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Reprolysin-like |automated matches |Sharp-nosed viper (Deinagkistrodon acutus) [TaxId: 36307]
 d1atla_ :     (GLN5)  (GLY149)   [view usage] : d.92.1.9 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Reprolysin-like |Snake venom metalloprotease |Western diamonback rattlesnake (Crotalus atrox), atrolysin C [TaxId: 8730]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  d.92