Protein Concepts Dictionary

Tableau information

Concept source:  d1usla_  amino acid (a.a.) range (ARG5)(ARG150)

nSSEs in this Concept: 12

String of secondary struct.elems. (SSEs) defining this concept: EHEEHEHEHEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (ARG5)   (ASP11) E1
	   (TYR15)   (GLN27) H2
	   (HIS30)   (GLY36) E3
	   (ASP43)   (PRO47) E4
	   (PRO47)   (ASP60) H5
	   (SER63)   (GLY69) E6
	   (ASN73)   (LYS81) H7
	   (GLY84)   (LEU89) E8
	   (SER92)  (ASN104) H9
	  (GLN106)  (GLY111) E10
	  (VAL117)  (PHE127) H11
	  (ARG137)  (ARG150) H12

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                  
H2     -165.4°   H2                                                                           
E3      -31.1° -157.0°   E3                                                                    
E4     -134.3°   59.2°  118.3°   E4                                                             
H5     -168.4°   26.0°  141.9°  -34.4°   H5                                                      
E6      -16.5°  150.4°  -47.4° -140.3° -167.4°   E6                                               
H7      122.9°  -70.2°   93.0°  -42.0°  -48.9°  139.2°   H7                                        
E8      -61.8°  106.0°  -92.5° -129.8°  125.3°  -45.3° -171.8°   E8                                 
H9      123.0°  -71.1°   94.8°   34.7°  -47.5°  138.4°   -8.6°  163.8°   H9                          
E10     -32.8°  133.3°  -62.3° -148.8°  155.8°  -17.3°  155.3°  -30.7°  155.6°   E10                  
H11     141.7°  -52.8°  115.3°   21.5°  -27.6°  154.8°  -24.9°  147.5°  -20.7°  169.3°   H11           
H12      55.8° -132.5°   25.0° -104.5° -118.8°   71.8°  -70.6°  115.9°  -74.2°   85.2°  -94.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1usla_ :     (ARG5)  (ARG150)   [view usage] : c.121.1.1 |Ribose/Galactose isomerase RpiB/AlsB |Ribose/Galactose isomerase RpiB/AlsB |Ribose/Galactose isomerase RpiB/AlsB |Alternate ribose 5-phosphate isomerase B, RpiB |Mycobacterium tuberculosis [TaxId: 1773]
 d2besc_ :     (ARG5)  (THR151)   [view usage] : c.121.1.1 |Ribose/Galactose isomerase RpiB/AlsB |Ribose/Galactose isomerase RpiB/AlsB |Ribose/Galactose isomerase RpiB/AlsB |Alternate ribose 5-phosphate isomerase B, RpiB |Mycobacterium tuberculosis [TaxId: 1773]
 d2vvoa_ :     (ARG5)  (ARG150)   [view usage] : c.121.1.1 |Ribose/Galactose isomerase RpiB/AlsB |Ribose/Galactose isomerase RpiB/AlsB |Ribose/Galactose isomerase RpiB/AlsB |Alternate ribose 5-phosphate isomerase B, RpiB |Mycobacterium tuberculosis [TaxId: 1773]
 d1usld_ :     (SER2)  (THR151)   [view usage] : c.121.1.1 |Ribose/Galactose isomerase RpiB/AlsB |Ribose/Galactose isomerase RpiB/AlsB |Ribose/Galactose isomerase RpiB/AlsB |Alternate ribose 5-phosphate isomerase B, RpiB |Mycobacterium tuberculosis [TaxId: 1773]
 d2vvra_ :     (ALA5)  (GLN146)   [view usage] : c.121.1.0 |Ribose/Galactose isomerase RpiB/AlsB |Ribose/Galactose isomerase RpiB/AlsB |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d2besb_ :     (SER2)  (THR151)   [view usage] : c.121.1.1 |Ribose/Galactose isomerase RpiB/AlsB |Ribose/Galactose isomerase RpiB/AlsB |Ribose/Galactose isomerase RpiB/AlsB |Alternate ribose 5-phosphate isomerase B, RpiB |Mycobacterium tuberculosis [TaxId: 1773]
 d1uslc_ :     (ARG5)  (THR151)   [view usage] : c.121.1.1 |Ribose/Galactose isomerase RpiB/AlsB |Ribose/Galactose isomerase RpiB/AlsB |Ribose/Galactose isomerase RpiB/AlsB |Alternate ribose 5-phosphate isomerase B, RpiB |Mycobacterium tuberculosis [TaxId: 1773]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 c.121