Protein Concepts Dictionary

Tableau information

Concept source:  d2jhza_  amino acid (a.a.) range (ASN69)(LYS200)

nSSEs in this Concept: 13

String of secondary struct.elems. (SSEs) defining this concept: EEHEEEEEEEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ASN69)   (CYS79) E1
	   (LEU86)   (THR91) E2
	   (ASP93)   (LYS99) H3
	   (LYS99)  (LYS105) E4
	  (GLU109)  (ARG120) E5
	  (GLU121)  (GLY125) E6
	  (TYR128)  (ARG134) E7
	  (ASP140)  (MET145) E8
	  (GLY147)  (PRO151) E9
	  (SER155)  (PRO161) E10
	  (VAL162)  (GLY168) E11
	  (GLY173)  (THR182) E12
	  (TRP192)  (LYS200) E13

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                         
E2     -170.5°   E2                                                                                  
H3       20.1° -157.7°   H3                                                                           
E4       40.7° -147.2°  -53.2°   E4                                                                    
E5      164.2°  -16.6° -174.2°  132.5°   E5                                                             
E6      -50.7°  133.8°  -35.1°  -59.6°  143.8°   E6                                                      
E7      -49.5°  124.4°  -34.8°  -87.8°  139.6°   51.4°   E7                                               
E8      124.5°  -60.5°  141.4°   88.4°  -44.4° -131.8°  171.5°   E8                                        
E9      124.8°  -49.9°  139.2°  120.6°  -41.5°  173.7°  122.7°   53.7°   E9                                 
E10     -43.5°  141.2°  -29.2°  -53.6°  150.4°   -7.4°  -50.6°  131.3°  168.1°   E10                         
E11     -52.7°  121.7°  -37.0°  -90.2°  137.4°   50.5°   -3.9° -175.2° -123.8°   50.3°   E11                  
E12     151.0°  -37.0°  157.5°  110.4°  -26.0°  126.0°  157.2°  -30.6°  -60.2°  130.3°  153.5°   E12           
E13       3.1°  172.5°   22.3°  -37.7°  162.4°  -51.3°  -52.6°  121.6°  124.4°  -44.0°  -55.7°  147.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1rhoa_ :    (ASN69)  (GLU193)   [view usage] : b.1.18.8 |Immunoglobulin-like beta-sandwich |E set domains |RhoGDI-like |Rho GDP-dissociation inhibitor 1, RhoGDI |Human (Homo sapiens) [TaxId: 9606]
 d1qvya_ :    (ASN69)  (ARG200)   [view usage] : b.1.18.8 |Immunoglobulin-like beta-sandwich |E set domains |RhoGDI-like |Rho GDP-dissociation inhibitor 1, RhoGDI |Human (Homo sapiens) [TaxId: 9606]
 d1fsoa_ :    (ASN69)  (LYS200)   [view usage] : b.1.18.8 |Immunoglobulin-like beta-sandwich |E set domains |RhoGDI-like |Rho GDP-dissociation inhibitor 1, RhoGDI |Human (Homo sapiens) [TaxId: 9606]
 d2ji0a_ :    (ASN69)  (LYS199)   [view usage] : b.1.18.8 |Immunoglobulin-like beta-sandwich |E set domains |RhoGDI-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1rhoc_ :    (ASN69)  (LYS200)   [view usage] : b.1.18.8 |Immunoglobulin-like beta-sandwich |E set domains |RhoGDI-like |Rho GDP-dissociation inhibitor 1, RhoGDI |Human (Homo sapiens) [TaxId: 9606]
 d2jhsa_ :    (ASN69)  (LYS200)   [view usage] : b.1.18.8 |Immunoglobulin-like beta-sandwich |E set domains |RhoGDI-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2bxwa_ :    (ASN69)  (LYS200)   [view usage] : b.1.18.8 |Immunoglobulin-like beta-sandwich |E set domains |RhoGDI-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1kmta_ :    (ASN69)  (LYS200)   [view usage] : b.1.18.8 |Immunoglobulin-like beta-sandwich |E set domains |RhoGDI-like |Rho GDP-dissociation inhibitor 1, RhoGDI |Human (Homo sapiens) [TaxId: 9606]
 d2jhza_ :    (ASN69)  (LYS200)   [view usage] : b.1.18.8 |Immunoglobulin-like beta-sandwich |E set domains |RhoGDI-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2jhxa_ :    (ASN69)  (LYS200)   [view usage] : b.1.18.8 |Immunoglobulin-like beta-sandwich |E set domains |RhoGDI-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2jhwa_ :    (ASN69)  (ILE198)   [view usage] : b.1.18.8 |Immunoglobulin-like beta-sandwich |E set domains |RhoGDI-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2jhta_ :    (ASN69)  (LYS200)   [view usage] : b.1.18.8 |Immunoglobulin-like beta-sandwich |E set domains |RhoGDI-like |automated matches |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   b.1