Protein Concepts Dictionary

Tableau information

Concept source:  d3h3oo2  amino acid (a.a.) range (ASP286)(MET464)

nSSEs in this Concept: 13

String of secondary struct.elems. (SSEs) defining this concept: EEHHEEHEHHEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ASP286)  (ILE291) E1
	  (LYS298)  (VAL309) E2
	  (GLY311)  (ARG322) H3
	  (THR326)  (ALA337) H4
	  (GLU342)  (ALA348) E5
	  (ARG362)  (ARG370) E6
	  (THR373)  (ASP399) H7
	  (PRO405)  (GLY411) E8
	  (GLY411)  (ASP417) H9
	  (ASP417)  (ASP428) H10
	  (ASP430)  (ALA434) E11
	  (THR439)  (VAL452) H12
	  (LEU458)  (MET464) H13

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                         
E2      140.4°   E2                                                                                  
H3      116.4°  -26.4°   H3                                                                           
H4     -138.1°   71.0°   97.3°   H4                                                                    
E5       51.3°  119.2°   96.4° -152.3°   E5                                                             
E6     -131.9°  -46.5°  -67.7°   39.9° -163.8°   E6                                                      
H7      -68.8°  149.1°  154.5°  -91.7°  -66.6°  129.4°   H7                                               
E8       73.1°  -69.8°  -43.8° -138.5°   64.0° -100.7°  129.6°   E8                                        
H9     -115.8°   66.8°   85.7°  -39.3°  166.3°   20.6° -115.3° -110.3°   H9                                 
H10    -112.7°  106.8°  127.2°   53.6°  -99.3°   93.3°  -44.4°  154.5°  -90.0°   H10                         
E11      41.6° -100.3°  -74.9° -157.6°   49.9° -119.4°  104.3°  -31.4° -118.4°  146.9°   E11                  
H12     -26.9° -162.4° -136.0° -126.6°  -45.8°  146.2°   42.4°   93.1°  125.6°  -86.8°   63.4°   H12           
H13     120.3°   42.8°   57.0°  -58.0°  147.6°  -18.1° -144.6°   83.7°  -29.3° -111.4°  101.3°  142.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.6°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3ezwg2 :   (GLY285)  (LYS463)   [view usage] : c.55.1.4 |Ribonuclease H-like motif |Actin-like ATPase domain |Glycerol kinase |Glycerol kinase |Escherichia coli [TaxId: 562]
 d3h3no2 :   (ASP286)  (VAL452)   [view usage] : c.55.1.4 |Ribonuclease H-like motif |Actin-like ATPase domain |Glycerol kinase |Glycerol kinase |Enterococcus casseliflavus [TaxId: 37734]
 d3h3ob2 :   (ASP286)  (SER463)   [view usage] : c.55.1.4 |Ribonuclease H-like motif |Actin-like ATPase domain |Glycerol kinase |Glycerol kinase |Enterococcus casseliflavus [TaxId: 37734]
 d1bu6x2 :   (VAL298)  (GLY452)   [view usage] : c.55.1.4 |Ribonuclease H-like motif |Actin-like ATPase domain |Glycerol kinase |Glycerol kinase |Escherichia coli [TaxId: 562]
 d3ge1b2 :   (GLY284)  (TRP463)   [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Staphylococcus aureus [TaxId: 93062]
 d3g25a2 :   (GLY284)  (TRP463)   [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Staphylococcus aureus [TaxId: 93062]
 d1bo5o2 :   (VAL298)  (GLY452)   [view usage] : c.55.1.4 |Ribonuclease H-like motif |Actin-like ATPase domain |Glycerol kinase |Glycerol kinase |Escherichia coli [TaxId: 562]
 d1r59o2 :   (LYS298)  (GLU466)   [view usage] : c.55.1.4 |Ribonuclease H-like motif |Actin-like ATPase domain |Glycerol kinase |Glycerol kinase |Enterococcus casseliflavus [TaxId: 37734]
 d3h3oo2 :   (ASP286)  (MET464)   [view usage] : c.55.1.4 |Ribonuclease H-like motif |Actin-like ATPase domain |Glycerol kinase |Glycerol kinase |Enterococcus casseliflavus [TaxId: 37734]
 d2zf5o2 :   (ASN278)  (TRP455)   [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Thermococcus kodakarensis [TaxId: 69014]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.55