Protein Concepts Dictionary

Tableau information

Concept source:  d2clib_  amino acid (a.a.) range (THR183)(PRO366)

nSSEs in this Concept: 13

String of secondary struct.elems. (SSEs) defining this concept: EHHEHHEHHHEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (THR183)  (GLY189) E1
	  (PRO194)  (GLN205) H2
	  (GLY209)  (LYS219) H3
	  (ASP225)  (CYS230) E4
	  (SER235)  (PHE241) H5
	  (PHE241)  (ASP247) H6
	  (LEU252)  (PRO257) E7
	  (ALA269)  (GLY274) H8
	  (SER301)  (PRO307) H9
	  (PRO311)  (GLY320) H10
	  (ARG321)  (SER326) E11
	  (THR328)  (GLY344) H12
	  (ALA348)  (PRO366) H13

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                         
H2      -65.4°   H2                                                                                  
H3      -43.9°  -28.1°   H3                                                                           
E4     -115.2°  124.6°  142.6°   E4                                                                    
H5      -79.1°  -57.0°  -46.6°  165.4°   H5                                                             
H6       61.8°  -85.7°  -60.9° -146.9°   41.3°   H6                                                      
E7       88.6°  112.2°  119.7°  -26.8°  166.2° -136.0°   E7                                               
H8      -74.7° -133.9° -105.9°  -92.3°  -94.4°  -54.6°  -88.1°   H8                                        
H9     -108.5° -150.0° -127.9°   85.0°  -93.2°  -67.0°  -96.5°  -34.7°   H9                                 
H10     -40.3°  -80.1°  -52.2° -139.0°   54.0°   21.9° -118.7°  -54.2°  -78.5°   H10                         
E11      74.0°   93.3°   99.9°  -44.5°  146.5°  131.8°  -20.1°  -97.3° -113.9° -110.6°   E11                  
H12      87.3°   22.0°   48.5° -114.6°   61.0°   98.4° -112.8°  152.3°  147.2°   98.6°  -97.8°   H12           
H13      29.7°  -66.6°  -38.5°  141.3°  -53.2°   33.4°  116.3°   67.4°  -93.6°   15.1°  103.5°   86.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1k7xb_ :   (THR183)  (PRO366)   [view usage] : c.79.1.1 |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase, beta-subunit |Salmonella typhimurium [TaxId: 90371]
 d2clib_ :   (THR183)  (PRO366)   [view usage] : c.79.1.1 |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |automated matches |Salmonella typhimurium [TaxId: 90371]
 d1k7eb_ :   (ALA184)  (PRO366)   [view usage] : c.79.1.1 |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase, beta-subunit |Salmonella typhimurium [TaxId: 90371]
 d2clmb_ :   (THR183)  (PRO366)   [view usage] : c.79.1.1 |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |automated matches |Salmonella typhimurium [TaxId: 90371]
 d1v8za1 :   (TYR178)  (GLY339)   [view usage] : c.79.1.1 |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase, beta-subunit |Pyrococcus furiosus [TaxId: 2261]
 d1v8zb_ :   (TYR178)  (GLY339)   [view usage] : c.79.1.1 |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase, beta-subunit |Pyrococcus furiosus [TaxId: 2261]
 d1a50b_ :   (THR183)  (PRO366)   [view usage] : c.79.1.1 |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase, beta-subunit |Salmonella typhimurium [TaxId: 90371]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.79