Protein Concepts Dictionary

Tableau information

Concept source:  d1l9ka_  amino acid (a.a.) range (LEU9)(ASP146)

nSSEs in this Concept: 13

String of secondary struct.elems. (SSEs) defining this concept: HHEHEHEEHEHEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (LEU9)   (LEU20) H1
	   (GLY21)   (SER31) H2
	   (GLN34)   (LEU40) E3
	   (LEU40)   (GLY48) H4
	   (HIS52)   (SER56) E5
	   (GLY58)   (ASN69) H6
	   (LEU70)   (GLY75) E7
	   (GLY75)   (GLY81) E8
	   (GLY85)   (LEU94) H9
	   (ARG98)  (THR104) E10
	  (THR118)  (LEU123) H11
	  (LEU123)  (GLY129) E12
	  (ASP141)  (ASP146) E13

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                         
H2     -130.2°   H2                                                                                  
E3      -41.2° -101.0°   E3                                                                           
H4      -71.3°  102.6°  -42.2°   H4                                                                    
E5      -91.7°  137.0° -120.0°  -99.7°   E5                                                             
H6      155.7°   31.7°  132.3°  120.7°  105.6°   H6                                                      
E7      -87.2°  -79.5°  -48.9°   23.2°  117.0°  -99.4°   E7                                               
E8      -50.4°  169.1°  -84.9°  -87.9°   41.4°  142.6° -111.1°   E8                                        
H9      122.6°   -8.6°   92.4°   96.7° -145.3°  -40.3°  -73.8°  169.7°   H9                                 
E10     -57.1°  172.3°  -86.5°  -81.5°   35.3°  140.7°  104.4°  -11.4° -178.2°   E10                         
H11    -118.7°   88.3°  -94.5°  -52.7°   76.8°   82.4°   50.5° -100.5°   89.5°  -89.2°   H11                  
E12     -67.1°  161.4°  -89.4°  -74.8°   30.6°  134.2°   96.5°  -25.2°  165.0°  -13.9°  -75.4°   E12           
E13     -42.1° -149.8°  -82.7° -100.0°  -56.3°  138.6° -122.0°  -21.1°  148.7°  -32.4° -121.6°  -46.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1r6aa_ :    (GLY10)  (ASP146)   [view usage] : c.66.1.25 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |mRNA cap methylase |An RNA cap (nucleoside-2'-O-)-methyltransferase domain of RNA polymerase NS5 |Flavivirus (Dengue virus type 2) [TaxId: 12637]
 d2p41a_ :     (LEU9)  (ASP146)   [view usage] : c.66.1.25 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |mRNA cap methylase |An RNA cap (nucleoside-2'-O-)-methyltransferase domain of RNA polymerase NS5 |Flavivirus (Dengue virus type 2) [TaxId: 12637]
 d1l9ka_ :     (LEU9)  (ASP146)   [view usage] : c.66.1.25 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |mRNA cap methylase |An RNA cap (nucleoside-2'-O-)-methyltransferase domain of RNA polymerase NS5 |Flavivirus (Dengue virus type 2) [TaxId: 12637]
 d2p3la_ :    (GLY10)  (PRO152)   [view usage] : c.66.1.25 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |mRNA cap methylase |An RNA cap (nucleoside-2'-O-)-methyltransferase domain of RNA polymerase NS5 |Flavivirus (Dengue virus type 2) [TaxId: 12637]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.66