Protein Concepts Dictionary

Tableau information

Concept source:  d1p81a2  amino acid (a.a.) range (GLY371)(PRO594)

nSSEs in this Concept: 16

String of secondary struct.elems. (SSEs) defining this concept: EEHEHHHEEHHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLY371)  (LEU375) E1
	  (ASN376)  (ASN381) E2
	  (PHE382)  (GLN388) H3
	  (GLY399)  (ASP405) E4
	  (ASP405)  (ASP417) H5
	  (GLN419)  (GLY424) H6
	  (GLY425)  (ILE431) H7
	  (ARG471)  (PRO475) E8
	  (GLY481)  (GLU487) E9
	  (SER498)  (TYR504) H10
	  (SER506)  (TRP512) H11
	  (THR516)  (VAL534) H12
	  (TYR538)  (ALA548) H13
	  (LEU552)  (GLY563) H14
	  (THR567)  (ILE573) H15
	  (SER589)  (PRO594) H16

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                              
E2      -46.1°   E2                                                                                                       
H3     -142.2°  104.0°   H3                                                                                                
E4      -88.3°  -76.2°  -58.3°   E4                                                                                         
H5       38.9°   40.9° -136.9° -114.2°   H5                                                                                  
H6       31.2°   63.0° -166.0°  119.4°  -29.2°   H6                                                                           
H7       94.6°  133.7° -121.2°  135.3°   94.1°   71.0°   H7                                                                    
E8     -130.2° -147.1°  -59.0°  -71.0°  164.0°  134.8°   73.5°   E8                                                             
E9     -122.5° -111.7°  -36.9°  -37.9° -151.8°  150.0°  110.6°  -37.3°   E9                                                      
H10     -57.4°  -96.1° -118.9°  -72.3°  -93.6°   69.9°   72.0°   73.2°   82.0°   H10                                              
H11     -74.0° -119.7°  132.3° -112.7°  -90.6°  -61.7°   29.3°   73.7°  104.3°  -43.2°   H11                                       
H12      54.2°   19.7°  -90.1°  -56.6°   59.9°   78.4°  148.6° -127.6°  -92.2°  -90.9°  125.8°   H12                                
H13    -151.9°  154.4°   65.3°  112.4° -132.3° -124.0°  -57.4°   48.9°   74.6° -109.4°  -80.4°  153.4°   H13                         
H14      22.4°  -45.7° -122.1°  -65.9°   57.5°   53.4°  108.5°  116.1° -100.5°   50.4°   82.0°  -44.0° -159.8°   H14                  
H15    -127.2°  131.3°   89.1°  143.9° -100.0°  -96.0°  -47.3°   79.3°  106.6° -118.3°  -76.6°  146.7°   32.3°  148.8°   H15           
H16    -104.9° -144.9°  110.1°  129.7° -104.9°  -82.2°  -11.2°   63.6°  100.8°   75.0°   35.0°  159.1°  -47.4°  116.7°  -43.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1gg9a2 :   (GLY371)  (PRO594)   [view usage] : e.5.1.1 |Heme-dependent catalase-like |Heme-dependent catalase-like |Heme-dependent catalases |Catalase II |Escherichia coli, HPII [TaxId: 562]
 d1qf7a2 :   (GLY371)  (PRO594)   [view usage] : e.5.1.1 |Heme-dependent catalase-like |Heme-dependent catalase-like |Heme-dependent catalases |Catalase II |Escherichia coli, HPII [TaxId: 562]
 d1ggea2 :   (GLY371)  (PRO594)   [view usage] : e.5.1.1 |Heme-dependent catalase-like |Heme-dependent catalase-like |Heme-dependent catalases |Catalase II |Escherichia coli, HPII [TaxId: 562]
 d1p7ya2 :   (VAL365)  (PRO594)   [view usage] : e.5.1.1 |Heme-dependent catalase-like |Heme-dependent catalase-like |Heme-dependent catalases |Catalase II |Escherichia coli, HPII [TaxId: 562]
 d1p81a2 :   (GLY371)  (PRO594)   [view usage] : e.5.1.1 |Heme-dependent catalase-like |Heme-dependent catalase-like |Heme-dependent catalases |Catalase II |Escherichia coli, HPII [TaxId: 562]
 d1ggja2 :   (GLY371)  (PRO594)   [view usage] : e.5.1.1 |Heme-dependent catalase-like |Heme-dependent catalase-like |Heme-dependent catalases |Catalase II |Escherichia coli, HPII [TaxId: 562]
 d1ggha2 :   (VAL365)  (PRO594)   [view usage] : e.5.1.1 |Heme-dependent catalase-like |Heme-dependent catalase-like |Heme-dependent catalases |Catalase II |Escherichia coli, HPII [TaxId: 562]
 d3p9sa1 :   (GLY371)  (PRO594)   [view usage] : e.5.1.1 |Heme-dependent catalase-like |Heme-dependent catalase-like |Heme-dependent catalases |automated matches |Escherichia coli K-12 [TaxId: 83333]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   e.5