Protein Concepts Dictionary

Tableau information

Concept source:  d4j6vb_  amino acid (a.a.) range (ARG6)(GLY283)

nSSEs in this Concept: 16

String of secondary struct.elems. (SSEs) defining this concept: EHHHEHHHHHHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (ARG6)   (ASN10) E1
	   (THR15)   (GLY33) H2
	   (GLY33)   (PHE48) H3
	   (SER62)   (SER82) H4
	   (THR88)   (TRP94) E5
	  (SER110)  (MET114) H6
	  (ALA132)  (TRP136) H7
	  (ARG165)  (LYS173) H8
	  (SER189)  (GLY196) H9
	  (LEU203)  (GLY212) H10
	  (GLY213)  (VAL218) H11
	  (VAL218)  (ASP224) H12
	  (VAL226)  (HIS245) H13
	  (ASN261)  (ASP264) H14
	  (THR272)  (MET277) H15
	  (ASN278)  (GLY283) H16

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                              
H2     -112.5°   H2                                                                                                       
H3      -79.0°  -75.2°   H3                                                                                                
H4      109.5°   96.3°  170.1°   H4                                                                                         
E5      -25.3° -107.5°  -54.6°  134.4°   E5                                                                                  
H6     -132.7°   29.6°  -66.3°  103.8° -116.3°   H6                                                                           
H7     -153.9°  -41.7°  -87.3°   82.8° -139.5°  -23.4°   H7                                                                    
H8     -131.5°   73.3°   55.2° -117.8°  106.2°   44.3°  -48.5°   H8                                                             
H9       52.5°  -94.8° -122.4°   62.7°   76.8° -123.8° -122.0°  168.0°   H9                                                      
H10      64.3°  -80.2° -122.8°   59.4°   86.6° -108.7° -106.7° -152.9°  -15.6°   H10                                              
H11    -116.6°   68.9°   38.4°  133.9°  -91.4°   44.0°   56.6°   17.2° -156.3° -146.9°   H11                                       
H12      96.8° -121.6°  162.5°  -25.3°  117.9° -125.4°  102.5° -121.7°   64.4°   68.6° -138.6°   H12                                
H13    -104.7°  113.6°   60.4° -120.3°  -85.1°   85.6°   87.2°  -41.4°  150.0°  165.6°  -45.3° -105.2°   H13                         
H14      98.2°   85.6°  157.5°  -20.2°  123.2°  102.0°   86.0° -130.2°   46.7°   40.3°  142.5°  -39.5° -140.5°   H14                  
H15     -77.9°  160.3° -124.1°   64.1°  -88.9°  148.6°  127.9° -113.2°   78.2°   90.3° -122.7°   38.8°  -77.8°   76.2°   H15           
H16     119.9°   80.7°  154.1°  -16.2° -145.1°   87.9°   68.1°  108.6°  -68.6°  -60.9°  122.6°  -41.2° -123.5°  -22.0°   79.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4j6va_ :     (ARG6)  (GLY283)   [view usage] : a.86.1.0 |Di-copper centre-containing domain |Di-copper centre-containing domain |automated matches |automated matches |Bacillus megaterium [TaxId: 1404]
 d4j6vb_ :     (ARG6)  (GLY283)   [view usage] : a.86.1.0 |Di-copper centre-containing domain |Di-copper centre-containing domain |automated matches |automated matches |Bacillus megaterium [TaxId: 1404]
 d4hd4a_ :     (ARG6)  (GLY283)   [view usage] : a.86.1.0 |Di-copper centre-containing domain |Di-copper centre-containing domain |automated matches |automated matches |Bacillus megaterium [TaxId: 1404]
 d3nq0a_ :     (ARG6)  (GLY283)   [view usage] : a.86.1.0 |Di-copper centre-containing domain |Di-copper centre-containing domain |automated matches |automated matches |Bacillus megaterium [TaxId: 1404]
 d4p6ra_ :     (TYR5)  (GLY283)   [view usage] : a.86.1.0 |Di-copper centre-containing domain |Di-copper centre-containing domain |automated matches |automated matches |Bacillus megaterium [TaxId: 1404]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  a.86