Protein Concepts Dictionary

Tableau information

Concept source:  d1l4ba_  amino acid (a.a.) range (HIS70)(HIS336)

nSSEs in this Concept: 18

String of secondary struct.elems. (SSEs) defining this concept: HHHEHEHHHHHEHHEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (HIS70)   (GLY76) H1
	   (PRO81)   (GLY95) H2
	   (THR97)  (GLY107) H3
	  (LYS109)  (ASP114) E4
	  (ARG145)  (GLY166) H5
	  (THR168)  (GLY176) E6
	  (THR180)  (PHE190) H7
	  (ASP194)  (VAL199) H8
	  (PRO206)  (GLN225) H9
	  (GLY231)  (LYS237) H10
	  (GLY240)  (GLY257) H11
	  (LEU258)  (GLY264) E12
	  (PHE265)  (ILE277) H13
	  (ALA278)  (TYR284) H14
	  (TYR284)  (HIS289) E15
	  (GLU293)  (SER304) H16
	  (SER304)  (LEU309) E17
	  (SER319)  (HIS336) H18

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                                            
H2      132.1°   H2                                                                                                                     
H3      136.0°  -23.0°   H3                                                                                                              
E4      -69.9° -150.3°  153.3°   E4                                                                                                       
H5     -117.6°   15.0°  -28.2°  161.1°   H5                                                                                                
E6      -35.5°  149.7°  169.0°  -37.3°  141.5°   E6                                                                                         
H7      109.3°  -96.0°   73.5°   92.8° -100.1°  114.1°   H7                                                                                  
H8      -92.2°   45.2°   65.0° -130.6°   37.0° -105.4°  136.4°   H8                                                                           
H9      134.0°  -93.8°  -84.8°   68.7° -108.0°  106.0°  -54.5°  130.3°   H9                                                                    
H10      44.7° -114.0° -135.3°  -64.8°  107.2°   35.7°  149.2°  -70.3°  126.2°   H10                                                            
H11     147.7°   36.5°  -17.6°  136.6°  -45.3° -173.2°  -60.2°   81.2°  -67.9° -150.4°   H11                                                     
E12       4.2°  136.1°  140.0°  -65.8°  121.7°  -31.8° -108.5°   95.4° -130.1°   44.3° -150.9°   E12                                              
H13     138.1°  -87.2°  -74.0°   80.5° -100.0°  117.0°   42.0°  129.7°  -15.1° -141.0°  -56.4° -134.9°   H13                                       
H14     -79.6°   52.8°   61.1° -144.7°   38.0° -108.0° -114.3°   31.6°  145.5°   81.1°   78.5°  -83.6° -134.8°   H14                                
E15     -23.2°  108.9°  115.8°  -90.9°   94.5°  -54.0° -119.6°   70.5° -157.3°   45.3°  131.2°  -27.2° -158.4°  -56.6°   E15                         
H16     147.0°  -65.0°  -47.3°  108.5°  -75.1°  143.3°   38.1° -110.2°  -42.2° -165.8°  -29.9° -146.5°   28.3° -106.8° -148.8°   H16                  
E17     -72.9°   64.3°   82.4° -117.8°   54.2°  -87.3° -146.7°   19.6°  146.4°  -53.7°   99.4°  -76.0°  148.8°   32.4°  -52.2°  129.0°   E17           
H18     134.4°  -36.4°  -13.4°  146.9°  -40.2°  168.6°   60.4°   77.3°  -79.3° -147.2°  -13.4°  137.8°  -66.5°   68.4°  118.4°  -38.4°   93.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4kqja_ :    (HIS70)  (HIS336)   [view usage] : c.39.1.1 |Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) |Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) |Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) |automated matches |Salmonella enterica [TaxId: 99287]
 d1d0sa_ :    (PRO81)  (HIS336)   [view usage] : c.39.1.1 |Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) |Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) |Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) |Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) |Salmonella typhimurium [TaxId: 90371]
 d4kqia_ :    (HIS70)  (HIS336)   [view usage] : c.39.1.1 |Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) |Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) |Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) |automated matches |Salmonella enterica [TaxId: 99287]
 d1l4ea_ :    (HIS70)  (HIS336)   [view usage] : c.39.1.1 |Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) |Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) |Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) |Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) |Salmonella typhimurium [TaxId: 90371]
 d1l4ba_ :    (HIS70)  (HIS336)   [view usage] : c.39.1.1 |Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) |Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) |Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) |Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) |Salmonella typhimurium [TaxId: 90371]
 d1jhaa_ :    (PRO81)  (HIS336)   [view usage] : c.39.1.1 |Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) |Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) |Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) |Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) |Salmonella typhimurium [TaxId: 90371]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.39