Protein Concepts Dictionary

Tableau information

Concept source:  d2i5vo_  amino acid (a.a.) range (ASN28)(LYS273)

nSSEs in this Concept: 22

String of secondary struct.elems. (SSEs) defining this concept: EEEEEEEEEEEEEEEEEEEEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ASN28)   (ASP33) E1
	   (MET38)   (SER43) E2
	   (GLY50)   (ALA56) E3
	   (LEU61)   (GLY65) E4
	   (GLY74)   (VAL79) E5
	   (LYS85)   (SER91) E6
	   (GLY95)  (VAL101) E7
	  (VAL110)  (SER116) E8
	  (ILE120)  (PHE126) E9
	  (SER133)  (ARG139) E10
	  (LEU145)  (GLY149) E11
	  (LYS157)  (LYS163) E12
	  (GLY164)  (ALA173) E13
	  (LYS175)  (GLY183) E14
	  (THR184)  (LYS193) E15
	  (GLU196)  (THR204) E16
	  (LYS211)  (TRP216) E17
	  (SER221)  (VAL227) E18
	  (THR232)  (THR238) E19
	  (THR242)  (GLN247) E20
	  (SER258)  (LYS264) E21
	  (ASP266)  (LYS273) H22

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                                                                        
E2      158.0°   E2                                                                                                                                                 
E3      -58.0°  143.9°   E3                                                                                                                                          
E4      115.1°  -42.9°  173.1°   E4                                                                                                                                   
E5      -89.8°  108.2°  -48.2°  136.0°   E5                                                                                                                            
E6       84.1°  -80.3°  119.8°  -56.4°  167.5°   E6                                                                                                                     
E7      -92.0°  101.0°  -64.3°  118.6°  -19.6°  170.7°   E7                                                                                                              
E8       86.6°  -82.6°  109.2°  -68.2°  153.2°  -15.7°  172.8°   E8                                                                                                       
E9      -92.1°   94.7°  -79.5°  102.3°  -37.9°  152.9°  -18.4°  168.6°   E9                                                                                                
E10      90.0°  -86.1°   95.1°  -83.8°  134.3°  -35.2°  153.7°  -19.5°  171.9°   E10                                                                                        
E11     -90.0°   96.6°  -78.6°  102.9°  -38.3°  152.1°  -18.9°  167.8°   -2.2° -172.6°   E11                                                                                 
E12     -97.2°  -86.3°   83.5°  -97.3°  115.8°  -54.5°  134.6°  -38.9°  152.3°  -19.7°  153.3°   E12                                                                          
E13      91.9°   75.8° -123.8°   54.6°  -91.2°   99.9°  -71.7°  115.4°  -53.3°  134.5°  -52.9°  151.4°   E13                                                                   
E14     -42.9° -154.5°   24.0° -150.3°   71.8°  -96.6°   86.3°  -88.0°   98.8°  -77.5°   97.5°  -71.7°  129.5°   E14                                                            
E15     146.2°   13.1° -155.0°   31.8° -112.6°   77.8° -101.3°   83.6°  -91.3°   91.3°  -92.8°   95.2°  -63.9°  166.5°   E15                                                     
E16     -29.0°  167.4°  -34.6°  139.3°   61.3° -111.3°   66.8° -109.9°   72.8° -106.1°   70.9° -104.3°   96.8°  -33.2°  160.3°   E16                                              
E17     140.5°  -18.8°  157.1°  -28.7° -126.9°   62.4° -117.6°   67.0° -108.0°   74.8° -109.6°   80.7°  -75.2°  152.0°  -16.8° -167.9°   E17                                       
E18     -19.1°  177.0°  -39.1°  134.1°  -73.5°  -98.4°   79.9°  -96.9°   85.2°  -94.4°   83.3°  -95.2°  101.9°  -28.2°  163.9°  -13.1°  159.0°   E18                                
E19    -169.1°   18.3°  128.1°  -58.7°   90.0°  -98.0°   84.3°   98.3°  -81.1°   97.8°  -83.2°   92.6°  -77.3°  146.3°  -26.9°  150.8°  -37.2°  163.5°   E19                         
E20     -22.0° -146.5°   62.9°  110.6° -105.1°   66.3° -111.7°   65.9° -113.9°   68.0° -111.8°  -76.3°  107.0°  -40.6°  141.1°  -45.1°  128.0°  -32.1°  164.0°   E20                  
E21     110.9°   84.0°  -73.9°  110.9°  -26.0° -164.3°   19.3° -159.5°   28.7° -143.9°   30.5° -124.7°   75.9°   97.7°  -86.8°   84.4° -102.0°   97.3°  -66.4°  129.4°   E21           
H22      26.3°  131.7°  -84.1°   89.1° -112.8°   64.4° -109.1°   72.2° -102.1°   83.1° -100.0°   97.6°  -79.0°  -66.0°  120.7°  -54.5°  114.3°  -45.5° -147.3°   28.8° -128.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2ol7b_ :    (ASN28)  (LYS273)   [view usage] : b.76.1.1 |open-sided beta-meander |Outer surface protein |Outer surface protein |automated matches |Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]
 d2ol8o_ :    (ASN28)  (LYS271)   [view usage] : b.76.1.1 |open-sided beta-meander |Outer surface protein |Outer surface protein |automated matches |Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]
 d2oybo_ :    (ASN28)  (LYS273)   [view usage] : b.76.1.1 |open-sided beta-meander |Outer surface protein |Outer surface protein |automated matches |Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]
 d2oy1o_ :    (VAL30)  (LYS272)   [view usage] : b.76.1.1 |open-sided beta-meander |Outer surface protein |Outer surface protein |automated matches |Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]
 d1fj1e_ :    (ASN28)  (LYS273)   [view usage] : b.76.1.1 |open-sided beta-meander |Outer surface protein |Outer surface protein |Outer surface protein A |Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]
 d2i5vo_ :    (ASN28)  (LYS273)   [view usage] : b.76.1.1 |open-sided beta-meander |Outer surface protein |Outer surface protein |automated matches |Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]
 d2oy5o_ :    (ASN28)  (LYS273)   [view usage] : b.76.1.1 |open-sided beta-meander |Outer surface protein |Outer surface protein |automated matches |Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]
 d2ol6o_ :    (VAL30)  (LYS272)   [view usage] : b.76.1.1 |open-sided beta-meander |Outer surface protein |Outer surface protein |automated matches |Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]
 d2g8co_ :    (ASN28)  (LYS273)   [view usage] : b.76.1.1 |open-sided beta-meander |Outer surface protein |Outer surface protein |automated matches |Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]
 d3aumo_ :    (ASN28)  (LYS273)   [view usage] : b.76.1.1 |open-sided beta-meander |Outer surface protein |Outer surface protein |automated matches |Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]
 d2i5zo_ :    (ASN28)  (LYS273)   [view usage] : b.76.1.1 |open-sided beta-meander |Outer surface protein |Outer surface protein |automated matches |Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]
 d2ol7a_ :    (ASN28)  (LYS273)   [view usage] : b.76.1.1 |open-sided beta-meander |Outer surface protein |Outer surface protein |automated matches |Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]
 d2pi3o_ :    (ASN28)  (LYS273)   [view usage] : b.76.1.1 |open-sided beta-meander |Outer surface protein |Outer surface protein |automated matches |Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.76