Protein Concepts Dictionary

Tableau information

Concept source:  d2vzua3  amino acid (a.a.) range (ASP336)(ASN673)

nSSEs in this Concept: 22

String of secondary struct.elems. (SSEs) defining this concept: EEEHEHEHHEHEEHEEHHHHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ASP336)  (THR340) E1
	  (GLY346)  (VAL351) E2
	  (ARG359)  (PRO365) E3
	  (ASN372)  (GLY387) H4
	  (ASN389)  (GLY395) E5
	  (ASP400)  (LEU409) H6
	  (LEU412)  (TRP417) E7
	  (GLY425)  (ASN428) H8
	  (VAL437)  (LEU455) H9
	  (ILE462)  (GLY467) E10
	  (ASP473)  (ASP488) H11
	  (LEU491)  (PRO495) E12
	  (GLY509)  (ASP517) E13
	  (PRO520)  (ASP526) H14
	  (SER540)  (ALA544) E15
	  (GLY545)  (THR550) E16
	  (THR550)  (MET557) H17
	  (SER559)  (PRO570) H18
	  (LYS587)  (GLY598) H19
	  (ASN602)  (TYR629) H20
	  (THR637)  (TYR641) E21
	  (ASN663)  (ASN673) H22

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                                                                        
E2      174.4°   E2                                                                                                                                                 
E3     -106.4°   79.1°   E3                                                                                                                                          
H4       63.1° -111.7°  165.2°   H4                                                                                                                                   
E5      -71.4°  113.2°  -40.8°  133.4°   E5                                                                                                                            
H6       97.5°  -77.5°  152.8°  -34.4° -166.4°   H6                                                                                                                     
E7      -60.1°  124.4°  -51.5°  122.0°  -11.5° -155.6°   E7                                                                                                              
H8       12.6° -162.4° -118.1°   50.7°  -84.1°   84.9°  -72.7°   H8                                                                                                       
H9      134.4°  -41.0°  116.2°  -71.9°  154.2°  -37.6°  165.4° -121.8°   H9                                                                                                
E10     -39.1°  146.1°  -67.7°  102.2°  -33.7°  136.5°  -23.5°   51.5°  169.7°   E10                                                                                        
H11    -163.1°   11.4°   89.6° -102.1°  120.9°  -68.5°  131.4° -152.3°  -34.2°  154.6°   H11                                                                                 
E12      21.3° -164.2°  -86.6°   81.3°  -56.9°  114.4°  -46.9°  -31.6°  147.1°  -23.4°  175.5°   E12                                                                          
E13      79.2° -103.8°  -73.0°   94.1°  -86.5°   99.4°  -86.4°  -79.6°   97.7°  -74.0°  111.5°  -65.1°   E13                                                                   
H14      89.9°  -87.1°  109.6°  -81.7°   89.1°  -82.9°   87.3°   90.0°  -90.6°   96.9°  -79.3°  104.2°  169.1°   H14                                                            
E15      72.1° -109.6°  -89.2°   77.8°  -97.8°   85.8°  -95.2°  -69.3°   92.4°  -78.0°  114.5°  -63.1°   16.3°  157.3°   E15                                                     
E16     134.9°  -47.5°  -71.4°  107.9° -110.8°   82.5° -119.6° -131.2°   53.8° -122.7°   55.0° -121.2°   56.6° -134.3°   62.9°   E16                                              
H17     -82.2°  103.1°   25.4° -145.1°  -16.9°  174.7°  -26.5°  -94.5°  141.6°  -43.1°  112.7°  -64.1°  -75.3°  102.4°  -89.1°  -94.0°   H17                                       
H18      39.4° -135.0°  144.8°  -28.7°  105.4°  -61.5°   94.1°   29.2°  -98.9°   77.2° -123.9°   60.4°  100.6°   71.0°  -86.2° -134.6°  119.5°   H18                                
H19      86.9°  -89.8° -136.8°   37.8°  150.4°   30.5°  142.6°   75.1°  -51.0°  119.2°  -85.0°   96.1°   69.4°  111.4°  -55.3°  -70.5° -144.4°  -64.4°   H19                         
H20      90.0°  -85.8°  124.4°  -67.9°  103.9°  -67.4°  100.8°   86.7°  -79.5°  106.5°  -76.1°  108.0°  161.9°  -15.6°  145.7° -129.6°  117.8°   62.7°   95.8°   H20                  
E21     -97.2°   87.7°  -42.6°  125.5°  -68.1°  122.4°  -73.3° -102.6°  103.1°  -73.1°   98.4°  -77.2°  -31.5°  152.2°  -47.7°  -49.7°  -52.5°  128.9°  -95.9° -166.6°   E21           
H22      98.5°  -76.2° -140.9°  -53.7°  128.7°  -43.3°  125.3°   90.6°  -57.2°  126.5°  -64.9°  119.6°  142.4°  -39.9°  127.6° -110.6°  142.0°   61.7°   73.1°  -24.9° -160.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2vzta3 :   (ASP336)  (ASN673)   [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Amycolatopsis orientalis [TaxId: 31958]
 d2vzoa3 :   (ASP336)  (ASN673)   [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Amycolatopsis orientalis [TaxId: 31958]
 d2vzsa5 :   (ASP336)  (ASN673)   [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Exochitosanase CsxA |Amycolatopsis orientalis [TaxId: 31958]
 d2vzua3 :   (ASP336)  (ASN673)   [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Amycolatopsis orientalis [TaxId: 31958]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.1