Protein Concepts Dictionary

Tableau information

Concept source:  d1b4ka_  amino acid (a.a.) range (ASP37)(THR323)

nSSEs in this Concept: 22

String of secondary struct.elems. (SSEs) defining this concept: EEEHHEHEHHEHEHHHEHEHHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ASP37)   (ASP46) E1
	   (ASN49)   (ILE54) E2
	   (GLY59)   (ILE65) E3
	   (ILE65)   (GLU71) H4
	   (ALA72)   (GLY79) H5
	   (PRO81)   (PRO87) E6
	  (GLY106)  (ARG118) H7
	  (GLY123)  (ALA129) E8
	  (THR134)  (GLY137) H9
	  (ASP151)  (GLY168) H10
	  (GLN170)  (ASP176) E11
	  (ARG181)  (GLY193) H12
	  (VAL197)  (SER208) E13
	  (SER208)  (VAL218) H14
	  (SER220)  (GLY225) H15
	  (GLU241)  (GLY253) H16
	  (MET256)  (LYS260) E17
	  (LEU266)  (PHE276) H18
	  (PRO279)  (VAL285) E19
	  (VAL285)  (GLY299) H20
	  (VAL305)  (GLY317) H21
	  (ASP319)  (THR323) E22

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                                                                        
E2      112.6°   E2                                                                                                                                                 
E3      -60.8°  148.8°   E3                                                                                                                                          
H4      153.5°  -82.3° -117.4°   H4                                                                                                                                   
H5     -171.0°   75.4° -110.2°  -27.6°   H5                                                                                                                            
E6      -29.9°   85.7°  -77.4°  164.8°  154.1°   E6                                                                                                                     
H7      124.3° -117.2°   86.3°  -35.0°  -51.1°  154.2°   H7                                                                                                              
E8      -60.2°   61.6°  -92.6°  142.5°  123.7°  -30.5° -173.4°   E8                                                                                                       
H9      -95.5°   73.1° -135.4°   67.0°   90.8° -100.6°   77.1°  108.0°   H9                                                                                                
H10      96.5° -137.7°   72.2°  -60.5°  -79.1°  126.3°  -28.0°  156.6°  -74.1°   H10                                                                                        
E11     -78.0°   36.6° -119.4°  118.8°  108.8°  -49.4°  153.5°  -26.7°   87.3°  160.1°   E11                                                                                 
H12      81.5° -164.3°   32.4°  -87.7°  -90.1°  105.9°  -54.4°  125.0° -113.9°  -41.5°  151.7°   H12                                                                          
E13     -86.6°   28.7° -141.4°  101.0°  102.0°  -64.5°  131.4°  -51.0°   62.1°  136.2°  -25.8°  167.1°   E13                                                                   
H14     -42.2°  149.4°  -46.3°  115.2° -131.7°  -72.0°   82.3° -101.6°  -90.3°   55.0° -119.5°   46.4° -120.7°   H14                                                            
H15      80.6°   44.7°  105.8° -122.4° -103.7°   50.8° -154.8°   20.5°  106.5°  177.1°  -19.6°  137.0°  -44.5° -122.1°   H15                                                     
H16      80.3°  157.1°   23.6°  -94.0°  -90.8°  100.7°  -63.1°  115.2° -126.2°  -53.5°  141.6°  -12.3°  165.0°   51.6°  125.1°   H16                                              
E17     -71.3°   48.9° -131.7°  108.2°  117.7°  -56.6°  129.1°  -55.7°   52.2°  122.0°  -38.2°  146.7°  -20.8°  100.5°  -57.6°  150.7°   E17                                       
H18     119.3°  110.3°   60.1°  -71.4°  -52.3°  121.9°  -63.4°  110.4° -137.4°  -77.9°  121.5°  -54.6°  137.2°  -99.4°  103.0°  -47.8°  157.8°   H18                                
E19     -50.3°   76.9° -109.8°  117.8°  138.1°  -49.8°  120.7°  -65.8°   51.0°  102.0°  -59.7°  118.6°  -48.7°   72.7°  -76.6°  123.9°  -28.0°  169.6°   E19                         
H20     -95.7°  -80.1°  129.4°   64.3°   89.8° -104.5°   70.7° -114.6°   -7.6°   66.6°  -94.7° -106.5°   69.6°   85.4° -114.0° -118.7°   59.0° -132.7°  -54.7°   H20                  
H21     117.6°   84.0°  -74.8°  -84.7°  -57.7°  103.4°  -91.3°   82.1°  145.3° -109.8°   89.5°  -83.1°  107.1° -120.9°   71.4°  -73.2°  126.4°  -32.1°  147.5°  146.6°   H21           
E22     -36.0°  -94.1°  -92.9°  125.4°  150.9°  -46.2°  116.2°  -70.4°  -60.1°   92.1°  -72.1°  101.6°  -65.6°   55.3°  -85.8°  106.2°  -45.3°  152.8°  -17.7°  -61.5°  149.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1gzga_ :    (ASP37)  (THR323)   [view usage] : c.1.10.3 |TIM beta/alpha-barrel |Aldolase |5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase) |5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase) |Pseudomonas aeruginosa [TaxId: 287]
 d1w5oa_ :    (ASP37)  (THR323)   [view usage] : c.1.10.3 |TIM beta/alpha-barrel |Aldolase |5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase) |automated matches |Pseudomonas aeruginosa [TaxId: 208964]
 d1b4ka_ :    (ASP37)  (THR323)   [view usage] : c.1.10.3 |TIM beta/alpha-barrel |Aldolase |5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase) |5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase) |Pseudomonas aeruginosa [TaxId: 287]
 d1w56a_ :    (ASP37)  (THR323)   [view usage] : c.1.10.3 |TIM beta/alpha-barrel |Aldolase |5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase) |automated matches |Pseudomonas aeruginosa [TaxId: 208964]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.1