Protein Concepts Dictionary

Tableau information

Concept source:  d1k8xb_  amino acid (a.a.) range (ALA85)(LEU391)

nSSEs in this Concept: 24

String of secondary struct.elems. (SSEs) defining this concept: HEHEHHEHHEHHEHHEHHHEHHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ALA85)  (GLY102) H1
	  (SER104)  (THR110) E2
	  (GLY113)  (LEU126) H3
	  (LYS129)  (GLY135) E4
	  (GLY135)  (ARG141) H5
	  (SER143)  (GLY153) H6
	  (GLU155)  (SER161) E7
	  (LEU166)  (SER178) H8
	  (SER178)  (THR183) H9
	  (THR183)  (GLY189) E10
	  (PRO194)  (GLN205) H11
	  (GLY209)  (LYS219) H12
	  (ASP225)  (CYS230) E13
	  (SER235)  (PHE241) H14
	  (PHE241)  (ASP247) H15
	  (LEU252)  (PRO257) E16
	  (ALA269)  (GLY274) H17
	  (SER301)  (PRO307) H18
	  (PRO311)  (GLY320) H19
	  (ARG321)  (SER326) E20
	  (THR328)  (GLY344) H21
	  (ALA348)  (PRO366) H22
	  (LEU371)  (SER377) E23
	  (PHE385)  (LEU391) H24

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                                                                                      
E2      150.1°   E2                                                                                                                                                               
H3      -43.9°  166.0°   H3                                                                                                                                                        
E4      132.4°  -18.0° -175.0°   E4                                                                                                                                                 
H5     -125.2°   83.1°  -83.6°   98.8°   H5                                                                                                                                          
H6      -33.9°  175.8°   10.1° -165.6°  -92.7°   H6                                                                                                                                   
E7      106.2°  -44.0°  149.8°  -27.3° -126.1°  140.1°   E7                                                                                                                            
H8       -9.0° -158.4°   35.5°  141.1° -118.2°  -25.7°  114.4°   H8                                                                                                                     
H9      -72.6° -136.4°   30.3° -154.3°   61.1°   40.1° -165.0°   63.7°   H9                                                                                                              
E10     162.5°  -27.1°  140.8°  -44.0°   68.2°  150.2°  -66.1° -161.0° -110.5°   E10                                                                                                      
H11     119.8°  -89.6°   76.7° -107.5°   28.4°   86.7° -131.5°  110.8°   47.1°  -65.5°   H11                                                                                               
H12     133.2°  -70.9°   97.0°  -87.9°   49.1°  106.2° -106.8°  124.8°   67.0°  -44.0°  -28.0°   H12                                                                                        
E13     -76.3°  -92.0°  -93.8°  -81.5°   97.2°  -88.6°  -78.5°   82.3°  115.0° -115.5°  124.8°  142.6°   E13                                                                                 
H14      90.3°  102.7°   72.0°  112.5°  -85.4°   76.8°  111.7°  -83.7°  -53.8°  -78.9°  -57.0°  -46.7°  165.3°   H14                                                                          
H15     100.9°   73.8° -107.1°   76.3°  110.5° -107.7°   70.3°  -99.7°  -95.0°   62.0°  -86.0°  -61.4° -146.6°   41.3°   H15                                                                   
E16    -103.2°  -66.9°  115.9°  -60.2°   84.2° -112.9°  -67.8°  109.4°  127.1°   88.6°  112.1°  119.6°  -27.1°  166.1° -136.0°   E16                                                            
H17      92.7°   59.8° -132.6°   46.3°  142.1° -124.3°   22.1°  -99.4° -144.1°  -74.6° -134.2° -106.2°  -91.9°  -94.8°  -54.8°  -87.7°   H17                                                     
H18      55.9°   96.2°  -97.0°   80.8°  177.9°  -88.0°   53.6°  -62.6° -118.6° -110.4° -149.8° -128.8°   84.8°  -92.8°  -67.4°  -97.3°  -36.9°   H18                                              
H19     122.4°  -52.9°  125.4°  -58.8°   98.1°  128.0°  -61.9° -121.8° -105.6°  -40.2°  -80.2°  -52.3° -139.1°   53.9°   22.2° -118.6°  -54.5°  -79.9°   H19                                       
E20    -120.5°  -58.1°  119.4°  -58.3°   66.0° -120.3°  -75.2°  125.0°  118.7°   73.9°   92.9°   99.5°  -45.0°  146.2°  131.9°  -20.3°  -97.1° -115.3° -110.5°   E20                                
H21     -99.2° -110.7°   55.3° -128.4°  -33.9°   65.4° -153.8°   90.5°   28.0°   87.8°   22.4°   48.8° -114.5°   61.1°   98.9° -112.8°  152.9°  145.4°   99.0°  -97.6°   H21                         
H22     134.1°   49.8° -124.0°   60.8°   82.8°  129.7°   71.2° -131.4°  -98.6°   29.6°  -66.3°  -38.4°  141.7°  -53.0°   33.7°  116.3°   67.8°  -95.2°   15.3°  103.4°   86.6°   H22                  
E23     -58.8° -114.1°   71.6° -103.6°  -96.2°  -66.4°  -97.0°   63.0°   94.9° -135.7°  118.7°  145.1°  -22.3°  143.2° -153.1°  -47.7°  105.3°   85.9° -158.9°  -62.0° -101.6° -163.9°   E23           
H24     154.2°   -7.7° -160.4°  -22.4°   76.8°  168.7°  -49.6°  163.1° -133.2°  -28.0°  -86.0°  -70.3°   88.4° -106.3°  -80.5°   62.3°   66.7°  102.6°  -58.9°   51.6° -106.2°  -54.1°  110.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2clob_ :    (GLN90)  (LEU391)   [view usage] : c.79.1.1 |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |automated matches |Salmonella typhimurium [TaxId: 90371]
 d1kfcb_ :    (ALA85)  (ALA393)   [view usage] : c.79.1.1 |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase, beta-subunit |Salmonella typhimurium [TaxId: 90371]
 d1k3ub_ :    (ALA85)  (ALA393)   [view usage] : c.79.1.1 |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase, beta-subunit |Salmonella typhimurium [TaxId: 90371]
 d1bksb_ :    (ALA85)  (ARG394)   [view usage] : c.79.1.1 |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase, beta-subunit |Salmonella typhimurium [TaxId: 90371]
 d1ubsb_ :    (GLN90)  (LEU391)   [view usage] : c.79.1.1 |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase, beta-subunit |Salmonella typhimurium [TaxId: 90371]
 d1qopb_ :    (ALA85)  (LEU391)   [view usage] : c.79.1.1 |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase, beta-subunit |Salmonella typhimurium [TaxId: 90371]
 d1k8xb_ :    (ALA85)  (LEU391)   [view usage] : c.79.1.1 |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase, beta-subunit |Salmonella typhimurium [TaxId: 90371]
 d1a5sb_ :    (ALA85)  (ASP389)   [view usage] : c.79.1.1 |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase, beta-subunit |Salmonella typhimurium [TaxId: 90371]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.79