################################################################################################
# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Sat Jul 23 03:28:17 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/neurotox.html
################################################################################################
#====================================
# Aligned_structures: 3
#   1: 1chl.pdb
#   2: 1pnh.pdb
#   3: 1sis.pdb
#
# Length:         46
# Identity:        8/ 46 ( 17.4%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     18/ 46 ( 39.1%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           24/ 46 ( 52.2%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1chl.pdb                1  -MCMPCFTTDHQ---MARKCDDCCGGKG----RGKCYGPQCLCR--   36
1pnh.pdb                1  ------------TVCNLRRCQLSCR---SLGLLGKCIGVKCECVKH   31
1sis.pdb                1  M-CMPCFTTDPN---MAKKCRDCCGG------NGKCFGPQCLCNR-   35
                                          markC dcCg        GKC GpqClC   


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
################################################EOF#################################################