################################################################################################
# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Sat Jul 23 10:48:54 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/lipase.html
################################################################################################
#====================================
# Aligned_structures: 5
#   1: 1bu8.pdb
#   2: 1etha.pdb
#   3: 1hpla.pdb
#   4: 1lpbb.pdb
#   5: 1rp1.pdb
#
# Length:        460
# Identity:      226/460 ( 49.1%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:    314/460 ( 68.3%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           34/460 (  7.4%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1bu8.pdb                1  KEVCYGHLGCFSNDKPWAGMLQRPLKIFPWSPEDIDTRFLLYTNENPNNYQKISATEPDT   60
1etha.pdb               1  SEVCFPRLGCFSDDAPWAGIVQRPLKILPWSPKDVDTRFLLYTNQNQNNYQELVA-DPST   59
1hpla.pdb               1  NEVCYERLGCFSDDSPWAGIVERPLKILPWSPEKVNTRFLLYTNENPDNFQEIVA-DPST   59
1lpbb.pdb               1  KEVCYERLGCFSDDSPWSGITERPLHILPWSPKDVNTRFLLYTNENPNNFQEVAA-DSSS   59
1rp1.pdb                1  KEVCYEQIGCFSDAEPWAGTAIRPLKVLPWSPERIGTRFLLYTNKNPNNFQTLLPSDPST   60
                            EVCy  lGCFSdd PWaG   RPLkilPWSP    TRFLLYTN NpnN Q   a dpst

1bu8.pdb               61  IKFSNFQLDRKTRFIVHGFIDKGEDGWLLDMCKKMFQVEKVNCICVDWRRGSRTEYTQAS  120
1etha.pdb              60  ITNSNFRMDRKTRFIIHGFIDKGEEDWLSNICKNLFKVESVNCICVDWKGGSRTGYTQAS  119
1hpla.pdb              60  IQSSNFNTGRKTRFIIHGFIDKGEESWLSTMCQNMFKVESVNCICVDWKSGSRTAYSQAS  119
1lpbb.pdb              60  ISGSNFKTNRKTRFIIHGFIDKGEENWLANVCKNLFKVESVNCICVDWKGGSRTGYTQAS  119
1rp1.pdb               61  IGASNFQTDKKTRFIIHGFIDKGEENWLLDMCKNMFKVEEVNCICVDWKKGSQTSYTQAA  120
                           I  SNF   rKTRFIiHGFIDKGEe WL   Ckn FkVE VNCICVDWk GSrT YtQAs

1bu8.pdb              121  YNTRVVGAEIAFLVQVLSTEMGYSPENVHLIGHSLGAHVVGEAGRRLEGHVGRITGLDPA  180
1etha.pdb             120  QNIRIVGAEVAYFVEVLKSSLGYSPSNVHVIGHSLGSHAAGEAGRRTNGTIERITGLDPA  179
1hpla.pdb             120  QNVRIVGAEVAYLVGVLQSSFDYSPSNVHIIGHSLGSHAAGEAGRRTNGAVGRITGLDPA  179
1lpbb.pdb             120  QNIRIVGAEVAYFVEFLQSAFGYSPSNVHVIGHSLGAHAAGEAGRRTNGTIGRITGLDPA  179
1rp1.pdb              121  NNVRVVGAQVAQMLSMLSANYSYSPSQVQLIGHSLGAHVAGEAGSRTP-GLGRITGLDPV  179
                            N R VGAevA  v  L     YSPsnVh IGHSLG H aGEAGrRt    gRITGLDPa

1bu8.pdb              181  EPCFQGLPEEVRLDPSDAMFVDVIHTDSAPIIPYLGFGMSQKVGHLDFFPNGGKEMPGCQ  240
1etha.pdb             180  EPCFQGTPELVRLDPSDAKFVDVIHTDAAPIIPNLGFGMSQTVGHLDFFPNGGKQMPGCQ  239
1hpla.pdb             180  EPCFQGTPELVRLDPSDAQFVDVIHTDIAPFIPNLGFGMSQTAGHLDFFPNGGKEMPGCQ  239
1lpbb.pdb             180  EPCFQGTPELVRLDPSDAKFVDVIHTDGAPIVPNLGFGMSQVVGHLDFFPNGGVEMPGCK  239
1rp1.pdb              180  EASFQGTPEEVRLDPTDADFVDVIHTDAAPLIPFLGFGTSQQMGHLDFFPNGGEEMPGCK  239
                           EpcFQGtPE VRLDPsDA FVDVIHTD AP iP LGFGmSQ  GHLDFFPNGG eMPGC 

1bu8.pdb              241  ------KNILSAIVDI-NGIWEGTQNFVACNHLRSYKYYASSILNPDGFLGYPCSSYEKF  293
1etha.pdb             240  KNILSQ------IVDIDGIWEG-TRDFVACNHLRSYKYYADSILNPDGFAGFPCDSYNVF  292
1hpla.pdb             240  ------KNVLSQIVDI-DGIWQGTRDFAACNHLRSYKYYTDSILNPDGFAGFSCASYSDF  292
1lpbb.pdb             240  KNILSQ------IVDIDGIWEG-TRDFAACNHLRSYKYYTDSIVNPDGFAGFPCASYNVF  292
1rp1.pdb              240  ------KNALSQIVDL-DGIWEGTRDFVACNHLRSYKYYSESILNPDGFASYPCASYRAF  292
                                       IVDi       TrdF ACNHLRSYKYY  SIlNPDGFag pC SY  F

1bu8.pdb              294  QQNDCFPCPEEGCPKMGHYADQFEGKTATVE-QTVYLNTGDSGNFTRWRYKVSVTLSGAK  352
1etha.pdb             293  TANKCFPCPSEGCPQMGHYADRFPGKTNGVS-QVFYLNTGDASNFARWRYKVSVTLSGKK  351
1hpla.pdb             293  TANKCFPCSSEGCPQMGHYADRFPGRTKGVG-QLFYLNTGDASNFARWRYRVDVTLSGKK  351
1lpbb.pdb             293  TANKCFPCPSGGCPQMGHYADRYPGKTNDVG-QKFYLDTGDASNFARWRYKVSVTLSGKK  351
1rp1.pdb              293  ESNKCFPCPDQGCPQMGHYADKF--------AQKYFLNTGDSSNFARWRYGVSI-TLSGK  343
                             NkCFPCp  GCPqMGHYAD f         Q  yLnTGD sNFaRWRY Vsv lsg K

1bu8.pdb              353  KLSGYILVALYGNNGNSKQYEIFKGSLKPEARHVRDIDVDINVGEIQKVKFLWNA-----  407
1etha.pdb             352  VTGHI-LVSLFGNEGNSRQYEIYKGTLQPDNTHSDEFDSDVEVGDLQKVKFIWYNVI-NP  409
1hpla.pdb             352  VTGHV-LVSLFGNKGNSRQYEIFQGTLKPDNTYSNEFDSDVEVGDLEKVKFIWYNNVINL  410
1lpbb.pdb             352  VTGHI-LVSLFGNKGNSKQYEIFKGTLKPDSTHSNEFDSDVDVGDLQMVKFIWYNNVINP  410
1rp1.pdb              344  RATGQAKVALFGSKGNTHQFNIFKGILKPGSTHSNEFDAKLDVGTIEKVKFLWNNN--NP  401
                                 lV LfGn GNs QyeIfkG LkP  ths efD d  VG   kVKF W n     

1bu8.pdb              408  -APTLGASQITVQSGVDGKEYNFCSSDTVREDVLQSLYPC  446
1etha.pdb             410  TLPRVGASKITVERN-DGKVYDFCSQETVREEVLLTLNPC  448
1hpla.pdb             411  TLPKVGASKITVERN-DGSVFNFCSEETVREDVLLTLTAC  449
1lpbb.pdb             411  TLPRVGASKIIVETN-VGKQFNFCSPETVREEVLLTLTPC  449
1rp1.pdb              402  TFPKVGAAKITVQKGEEKTVHSFCSESTVREDVLLTLTPC  441
                             P vGAskItV     g    FCS  TVRE VLltL pC


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
################################################EOF#################################################