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# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Fri Jul 22 20:09:47 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/ghf2.html
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#====================================
# Aligned_structures: 2
#   1: 1bgla.pdb
#   2: 1bhga.pdb
#
# Length:        347
# Identity:       68/347 ( 19.6%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     68/347 ( 19.6%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           98/347 ( 28.2%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1bgla.pdb               1  EVRIENGLLLLNGKPLLIRGVNRHEHHPLHGQVMDEQTMVQDILLMKQNNFNAVRCSHYP   60
1bhga.pdb               1  -VAVTKSQFLINGKPFYFHGVNKHEDADIRGKGFDWPLLVKDFNLLRWLGANAFRTSHYP   59
                            V       L NGKP    GVN HE     G   D    V D  L      NA R SHYP

1bgla.pdb              61  NHPLWYTLC-DRYGLYVVDEANIETHGMVPMNRLTDDPRWLPAMSERVTRMVQRDRNHPS  119
1bhga.pdb              60  YAEEV-MQMCDRYGIVVIDECPGVGLA---LPQ-FFNNVSLHHHMQVMEEVVRRDKNHPA  114
                                     DRYG  V DE                    L          V RD NHP 

1bgla.pdb             120  VIIWSLGNES-GH-----GANHDALYRWIKSVDPSRPVQYEGGGAD--------TTATDI  165
1bhga.pdb             115  VVMWSVANEPAS-HLESAGYYLKMVIAHTKSLDPSRPVTFVSN---SNYAADKGAPYVDV  170
                           V  WS  NE         G          KS DPSRPV                    D 

1bgla.pdb             166  ICPMYARVDEDQPFPAVPKW-----------SIKKWLSLP---GETRPLILCEYAH-AMG  210
1bhga.pdb             171  ICLNS-YYSWY---------HDYGHLELIQLQLATQFEN-WYKKYQKPIIQSEYGAETIA  219
                           IC                                             P I  EY      

1bgla.pdb             211  NSLG---------------GFAKYWQAFRQ--YPRLQGGFVWDWVDQ-SLIKYDENGNPW  252
1bhga.pdb             220  GF--HQDPPLMFTEEYQKSLLEQYHLGLDQKRRKYVVGELIWNFADFMTEQ---------  268
                                                  Y     Q       G   W   D              

1bgla.pdb             253  SAY-GGDF-GDTPNDRQFCMNGLVFADRTPHPALTEAKHQQQ-----  292
1bhga.pdb             269  ---SPTRVLG--------NKKGIFTRQRQPKSAAFLLRERYWKIANE  304
                                    G           G     R P  A              


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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