################################################################################################
# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Mon Jul 25 15:47:48 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/YgbB.html
################################################################################################
#====================================
# Aligned_structures: 3
#   1: 1gx1a.pdb
#   2: 1iv3a.pdb
#   3: 1jn1a.pdb
#
# Length:        167
# Identity:       50/167 ( 29.9%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:    121/167 ( 72.5%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           30/167 ( 18.0%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1gx1a.pdb               1  -ERIGHGFDVHAFGGEGPIIIGGVRIPYE-KGLL------AHSDGDVALHALTDALLGAA   52
1iv3a.pdb               1  MIRIGHGFDVHAFGE-------DRPLIIGGVEVPYHTGFIAHSDGDVALHALTDAILGAA   53
1jn1a.pdb               1  --RIGYGEDSHRLEEGRPLYLCGLLIPSP-VGAL------AHSDGDAAMHALTDALLSAY   51
                             RIGhGfDvHafge       g  ip   vg l      AHSDGDvAlHALTDAlLgAa

1gx1a.pdb              53  ALGDIGKLFPDTDPAFK---GADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKL-PHI  108
1iv3a.pdb              54  ALGDIGKLFPDTDM---QYKNADSRGLLREAFRQVQEKGYKIGNVDITIIAQAPKMRPHI  110
1jn1a.pdb              52  GLGDIGLLFPDTDPRWR---GERSEVFLREAMRLVEARGAKLLQASLVLTLDRPKLGPHR  108
                           aLGDIGkLFPDTDp      gadSr lLREA R vqakGyklgnvd tiiaqaPKl PHi

1gx1a.pdb             109  P-QRVFIAEDLGCH-DDVNVKATTTEKLGFTGRGEGIACEAVALLIK  153
1iv3a.pdb             111  DAMRAKIAEDLQCDIEQVNVKATTTEKLGFTGRQEGIACEAVALLIR  157
1jn1a.pdb             109  KALVDSLSRLMRLPQDRIGLTFKTSEGL---AP-SHVQARAVVLLD-  150
                              r  iaedl c  d vnvkatTtEkL   gr egiaceAVaLLi 


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
################################################EOF#################################################