################################################################################################
# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Fri Jul 22 23:25:24 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/TBCA.html
################################################################################################
#====================================
# Aligned_structures: 2
#   1: 1h7ca.pdb
#   2: 1qsda.pdb
#
# Length:        108
# Identity:       16/108 ( 14.8%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     16/108 ( 14.8%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           15/108 ( 13.9%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1h7ca.pdb               1  -PRVRQIKIKTGVVRRLVKERVYEKEAKQQEEKIEK-RAEDGE-NYDIKKQAEILQESR-   56
1qsda.pdb               1  TQLDIKVKALKRLTKEEGYYQQELKDQEAHVAKLKEDKS---VDPYDLKKQEEVLDDTKR   57
                                  K                K       K            YD KKQ E L     

1h7ca.pdb              57  -IPDCQRRLEAAYLDLQRILENEKDLE--E-AEEYKEARLVLDSVKL-   99
1qsda.pdb              58  LLPTLYEKIREFKEDLEQFLKTY-Q--GTEDVSDARSAITSAQELLDS  102
                             P           DL   L         E       A          


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
################################################EOF#################################################