################################################################################################
# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Sat Jul 23 04:16:47 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/SBP_bacterial_1.html
################################################################################################
#====================================
# Aligned_structures: 3
#   1: 1anf.pdb
#   2: 1d9ya.pdb
#   3: 1mrp.pdb
#
# Length:        398
# Identity:       37/398 (  9.3%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:    217/398 ( 54.5%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:          118/398 ( 29.6%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1anf.pdb                1  KIEEGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPD--KLEEKFPQVAAT-GDGP   57
1d9ya.pdb               1  -----DITVYNG--QHKEAAQAVADAFTRATGIKVKLNCAKGDQLAGQIKEEG--SRSPA   51
1mrp.pdb                1  -----DITVYNG--QHKEAATAVAKAFEQETGIKVTLNSGKSEQLAGQLKEEG--DKTPA   51
                                ditvyng  qhkeaa aVakaFe  TGIKVtln  k  qLagq keeg     pa

1anf.pdb               58  DI-IFWAHDRFGGYAQSGLLAEITPDKAFQDKLYPFTWDA-----VRYNGKLIAYPIAVE  111
1d9ya.pdb              52  DVFYSEQIPALATLSAANLLEPLPA--STINETR------GKGVPVAA--KKDWVALSGR  101
1mrp.pdb               52  DVFYTEQTATFADLSEAGLLAPISE--QTIQQTA------QKGVPLAP--KKDWIALSGR  101
                           Dv y eq   fa ls agLLapi     ti  t            va   Kkdw alsgr

1anf.pdb              112  ALSLIYNKDLLP-N-PPKTWEEIPA-LDKELKAKGKSALMFNLQEPYFTWPLIAAD-GGY  167
1d9ya.pdb             102  SRVVVYDTRKLSEKDLEKSVLNYATPKWK------NR-IGYVPTSGAFLEQIVAIVKL--  152
1mrp.pdb              102  SRVVVYDHTKLSEKDMEKSVLDYATPKWK------GK-IGYVSTSGAFLEQVVALSKM--  152
                           srvvvYd  kLs k  eKsvl yat kwK         igyv tsgaFleq vA      

1anf.pdb              168  AFKYENGKYDIKDVGVDNA-GAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTI  226
1d9ya.pdb             153  -------------------KGEAAALKWLKGLKEYG--KPYAKNSVALQAVENGEIDAAL  191
1mrp.pdb              153  -------------------KGDKVALNWLKGLKENG--KLYAKNSVALQAVENGEVPAAL  191
                                               G kaaL wLkgLkeng  k yaknSvAlqAvenGE  aal

1anf.pdb              227  NG-PWAWSNIDTSKV---NYGVTVLPTFKGQPSK--PFVGVLSAGINAASPNKELAKEFL  280
1d9ya.pdb             192  INNYYWHAFAREKGVQNVHTRLNF-VRH-RD---PGALVTYSGAAVLKSSQNKDEAKKFV  246
1mrp.pdb              192  INNYYWYNLAKEKGVENLKSRLYF-VRH-QD---PGALVSYSGAAVLKASKNQAEAQKFV  246
                           in yyw   a ekgV     rl f vrh  d     alV ysgAavlkaS Nk eAkkFv

1anf.pdb              281  ENYLLTDEGLEAVNKDKPLGAVALKSYEEELAKDP------RIAATMENAQKGEIMP-NI  333
1d9ya.pdb             247  A-FLAGKEGQRALTAVRAEY-PLNPHVV-------STFNLEPIAKL-----EAPQVSATT  292
1mrp.pdb              247  D-FLASKKGQEALVAARAEY-PLRADVV-------SPFNLEPYEKL-----EAPVVSATT  292
                             fLa keGqeAl a raey pl   vv             piakl     eap vs tt

1anf.pdb              334  PQMSAFWYAVRTAVINAASGRQTVDEALKDAQTRIT--  369
1d9ya.pdb             293  VSEKEHATRLLEQAG---------------------MK  309
1mrp.pdb              293  AQDKEHAIKLIEEAG---------------------LK  309
                            q keha  l e ag                       


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
################################################EOF#################################################