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# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Mon Jul 25 15:36:10 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/SAM_decarbox.html
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#====================================
# Aligned_structures: 2
#   1: 1i7bb.pdb
#   2: 1mhmb.pdb
#
# Length:        338
# Identity:       95/338 ( 28.1%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     95/338 ( 28.1%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           58/338 ( 17.2%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1i7bb.pdb               1  AHFFEGTEKLLEVWFSRQQPQGS---GDLRTIPRSEWDILLKDVQCSIISVTKTDKQEAY   57
1mhmb.pdb               1  ------FEKRLEISFVE-PG---LFGKGLRSLSKAQLDEILGPAECTIVDNLSNDYVDSY   50
                                  EK LE  F             LR       D  L    C I      D    Y

1i7bb.pdb              58  VLSESMFVSKRRFILKTCGTTLLLKALVPLLKLARDYSGFDSIQSFFYSRKNFMKPSHQG  117
1mhmb.pdb              51  VLSESLFVYSYKIIIKTCGTTKLLLAIPPILRLAET-LSL-KVQDVRYTRGS--------  100
                           VLSES FV     I KTCGTT LL A  P L LA         Q   Y R          

1i7bb.pdb             118  YPHRNFQEEIEFLNAIF-P---NGAGYCMGRMN-SDCWYLYTLDFPES-----QPDQTLE  167
1mhmb.pdb             101  ---RHFSEEVAVLDGYFGKLAAGSKAVIMGSPDKTQKWHVYSASAG--SVQSNDPVYTLE  155
                              R F EE   L   F           MG       W  Y             P  TLE

1i7bb.pdb             168  ILMSELDPAVMDQFYMKDGV--TAKDVTRESGIRDLIPGSVIDATMFNPCGYSMNGMKSD  225
1mhmb.pdb             156  MCMTGLDREKASVFYKTE--ESSAAHMTVRSGIRKILPKSEICDFEFEPCGYSMNSIEG-  212
                             M  LD      FY        A   T  SGIR   P S I    F PCGYSMN     

1i7bb.pdb             226  GTYWTIHITPEPEFSYVSFETNL-SQ--TSYDDLIRKVVEVFKPGKFVTTLFVNQSSKC-  281
1mhmb.pdb             213  AAVSTIHITPEDGFTYASFESVGYNPKTMELGPLVERVLACFEPAEFSVALHADV-A--T  269
                               TIHITPE  F Y SFE             L   V   F P  F   L         

1i7bb.pdb             282  -------PQKIEGFKRLDCQSAMFND-YNFVFTSFAKK  311
1mhmb.pdb             270  KLLERICSVDVKGYSLAEWSPEEFGEGGSIVYQKFTRT  307
                                       G          F      V   F   


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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