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# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Fri Jul 22 22:55:46 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/Ran_BP1.html
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#====================================
# Aligned_structures: 2
#   1: 1k5db.pdb
#   2: 1rrpb.pdb
#
# Length:        147
# Identity:       81/147 ( 55.1%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     81/147 ( 55.1%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           14/147 (  9.5%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1k5db.pdb               1  NHDPQFE-PIVSLPEQEIKTLEEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKLLKH   59
1rrpb.pdb               1  ----HFEPVVPLPDKIEVKTGEEDEEEFFCNRAKLFRFDV-E-SKEWKERGIGNVKILRH   54
                                FE         E KT EEDEEE F  RAKLFRF       EWKERG G VK L H

1k5db.pdb              60  KEKGAIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAWVWNTHADFADECPKPELLAI  119
1rrpb.pdb              55  KTSGKIRLLMRREQVLKICANHYISPDMKLTPNAGSDRSFVWHA-LDYADELPKPEQLAI  113
                           K  G IRLLMRR   LKICANHYI P M L PNAGSDR  VW    D ADE PKPE LAI

1k5db.pdb             120  RFLNAENAQKFKTKFEECRKEIEEREK  146
1rrpb.pdb             114  RFKTPEEAALFKCKFEEAQSI------  134
                           RF   E A  FK KFEE          


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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