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# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Sat Jul 23 08:19:30 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/NTP_transferase.html
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#====================================
# Aligned_structures: 4
#   1: 1fxoa.pdb
#   2: 1g97a.pdb
#   3: 1hv9a.pdb
#   4: 1iina.pdb
#
# Length:        317
# Identity:       28/317 (  8.8%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     53/317 ( 16.7%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           91/317 ( 28.7%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1fxoa.pdb               1  --KRKGIILAGGSGTRLHPATLAISKQLLPVYDKPMIYYPLSTLMLAGIREILIISTPQD   58
1g97a.pdb               1  --SNFAIILAAGKGTRMK--S-DLPKVLHKVAGISMLEHVFRSVGAIQPEKTVTVVG-HK   54
1hv9a.pdb               1  -NAMSVVILAAGKGTRMY--S-DLPKVLHTLAGKAMVQHVIDAANELGAAHVHLVYG-HG   55
1iina.pdb               1  MKTRKGIILAGGSGTRLYPVTMAVSQQLLPIYDKPMIYYPLSTLMLAGIRDILIISTPQD   60
                                 iILA G GTR         k L     k M           g            

1fxoa.pdb              59  TPRFQQLLGDGSNWGLDLQYAVQPSPDGLAQAFLIGESFIG-N-DLSALVLGDNLYYGHD  116
1g97a.pdb              55  AELVEEVLA-G-----QTEFVTQSEQLGTGHAVMMTEPILEGLSGHTLVIAGDTPL----  104
1hv9a.pdb              56  GDLLKQALK-D----DNLNWVLQAEQLGTGHAMQQAAPFFA-DDEDILMLYGDVPL----  105
1iina.pdb              61  TPRFQQLLGDGSQWGLNLQYKVQPSPDGLAQAFIIGEEFIG-H-DDCALVLGDNIFYGHD  118
                                q L  g      l    Q    G   A    e f            GD       

1fxoa.pdb             117  -FHELLGSASQ--R----QTGASVFAYHVLDPERYGVVEFDQGGKAISLEEKPLE-----  164
1g97a.pdb             105  ITGESLKNLIDFHINHKN--VATILTAETDNPFGYGRIVRNDNAEVLRIVEQ---KDATD  159
1hv9a.pdb             106  ISVETLQRLRDAKP----QGGIGLLTVKLDDPTGYGRITRE-NGKVTGIVEH---KDATD  157
1iina.pdb             119  -LPKLMEAAVN--K----ESGATVFAYHVNDPERYGVVEFDQKGTAVSLEEKPLQ-----  166
                              e l              ga        dP  YG       g      E         

1fxoa.pdb             165  --PKSNYAVTGLYFYDQ-QVVDIARDLKP-SPRGELEITDVNRAYLERGQLSVEIM-GRG  219
1g97a.pdb             160  FEKQIKEINTGTYVFDNERLFEALKNINTNNAQGEYYITDVIGIFRETGEKVGAYTLKD-  218
1hv9a.pdb             158  EQRQIQEINTGILIANGADMKRWLAKLTNNNAQGEYYITDIIALAYQEGREIVAVHPQR-  216
1iina.pdb             167  --PKSNYAVTGLYFYDN-SVVEMAKNLKP-SARGELEITDINRIYMEQGRLSVAMM-GRG  221
                                    TG y  d          l    a GE  ITD      e G   va    r 

1fxoa.pdb             220  Y-AWLDTGTHDSLLEAGQFIATLENRQGLKVACPEEIAYRQKWIDAAQLEKLAAPLAKNG  278
1g97a.pdb             219  FDESLGVNDRVALATAESVMRRRINHKH-----------M--------------------  247
1hv9a.pdb             217  LSEVEGVNNRLQLSRLERVYQSEQAEKL-----------L--------------------  245
1iina.pdb             222  Y-AWLDTGTHQSLIEASNFIATIEERQGLKVSCPEEIAFRKNFINAQQVIELAGPLSKND  280
                               l       L  a                                            

1fxoa.pdb             279  YGQYLKRLLTETVY---  292
1g97a.pdb             248  --------------VNG  250
1hv9a.pdb             246  --------------LAG  248
1iina.pdb             281  YGKYLLKMV--------  289
                                            


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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