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# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Fri Jul 22 20:38:14 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/Hpr_kinase.html
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#====================================
# Aligned_structures: 2
#   1: 1jb1a.pdb
#   2: 1ko7a.pdb
#
# Length:        167
# Identity:       80/167 ( 47.9%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     80/167 ( 47.9%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           22/167 ( 13.2%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1jb1a.pdb               1  ER---RSHGVLVDIYGLGVLITGDSGVGKSETALELVQRGHRLIADDRVDVYQQDEQTIV   57
1ko7a.pdb               1  --RTTSLHGVLVDVYGVGVLITGDSGIGKSETALELIKRGHRLVADDNVEIREISKDELI   58
                                  HGVLVD YG GVLITGDSG GKSETALEL  RGHRL ADD V           

1jb1a.pdb              58  GAAPPILSHLLEIRGLGIIDV-NLFGAGAVREDTTISLIVHLEN----WTPDQLIFDVPV  112
1ko7a.pdb              59  GRAPKLIEHLLEIRGLGIINVMTLFGAGSILTEKRLRLNIHLENEETLRILD-----TEI  113
                           G AP    HLLEIRGLGII V  LFGAG         L  HLEN       D        

1jb1a.pdb             113  PKITVPVKVGRNLAIIIEVAAN-FRAKS-GYDATKTFEKNLNHLIEH  157
1ko7a.pdb             114  TKKTIPVRPGRNVAVIIEVAAMNYRLNIMGINTAEEFNDRLN-----  155
                            K T PV  GRN A IIEVAA   R    G      F   LN     


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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