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# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Fri Jul 22 20:17:01 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/GHMP_kinases_C.html
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#====================================
# Aligned_structures: 2
#   1: 1fi4a.pdb
#   2: 1h72c.pdb
#
# Length:        214
# Identity:       11/214 (  5.1%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     11/214 (  5.1%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           98/214 ( 45.8%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1fi4a.pdb               1  --QKACVLVVSDIKKDVSSTQGQLTVATSEL---FKERIEHVVPKRFEVRKAIVEKDFAT   55
1h72c.pdb               1  FKLDILIAIPNI---SINTKEAR---EILP-KAVGLKDLVNNVGKACGMVYALYNKDKSL   53
                                                                     V K      A   KD   

1fi4a.pdb              56  FAKETDSNSFHAT--CLDSFPPIFYND-------TSKRIISWCHTINQFYGETIVAYT-F  105
1h72c.pdb              54  FGRYM-----MSDKVIEP---------VRGKLIPNYFKIKEEVKDKV-------YGITIS   92
                           F                                     I                  T  

1fi4a.pdb             106  DAGPNAVLYYLAENESKLFAFIYKLFGSVPGWDKKFTTEQLEAFNHQFESSNFTARELDL  165
1h72c.pdb              93  GSGPSIIAFPKEEFIDEVENILRDYYE---------------------------------  119
                             GP        E                                               

1fi4a.pdb             166  ELQKDVARVILTQ--VGSGPQETNESLIDAKTGL  197
1h72c.pdb             120  ------NTIRTEVGKGVEVV--------------  133
                                                             


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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