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# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Fri Jul 22 19:59:48 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/Flavoprotein.html
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#====================================
# Aligned_structures: 2
#   1: 1e20a.pdb
#   2: 1g63a.pdb
#
# Length:        191
# Identity:       45/191 ( 23.6%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     45/191 ( 23.6%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           33/191 ( 17.3%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1e20a.pdb               1  R-KPRVLLAASGSVAAIKFGNLCHCFTEWA-EVRAVVTKSSLHFLDKLSLPQE---VTLY   55
1g63a.pdb               1  -MYGKLLICATASINVININHYIVELKQHFDEVNILFSPSSKNFINTDVLK--LFCDNLY   57
                                 L  A  S   I              EV      SS  F     L        LY

1e20a.pdb              56  TDEDEWSSWNKIG-DPVLHIELRRWADVLVIAPLSANTLGKIAGGLCDNLLTCIIRAWDY  114
1g63a.pdb              58  DEIKD--------PLL-NHINIVENHEYILVLPASANTINKIANGICDNLLTTVCLTG-Y  107
                                             HI            P SANT  KIA G CDNLLT       Y

1e20a.pdb             115  TKPLFVAPAMNTLMWNNPFTERHLLSLDELGITLIPPIKKRLACGDYGNGAMAEPSLIYS  174
1g63a.pdb             108  -QKLFIFPNMNIRMWGNPFLQKNIDLLKNNDVKVYSPDMN----K-N-NITMPNIENVLN  160
                              LF  P MN  MW NPF       L         P           N  M        

1e20a.pdb             175  TVRLFWESQAH  185
1g63a.pdb             161  FVLN-------  164
                            V         


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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