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# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Sat Jul 23 02:06:58 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/FN1.html
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#====================================
# Aligned_structures: 3
#   1: 1fbr1.pdb
#   2: 1fbr2.pdb
#   3: 1tpn.pdb
#
# Length:         53
# Identity:        7/ 53 ( 13.2%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     18/ 53 ( 34.0%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           11/ 53 ( 20.8%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1fbr1.pdb               1  --AEKCFDHAAGTSYVVGETWEK-PYQGWMMVDCTCLGEGSGRITCTSR----   46
1fbr2.pdb               1  ---NRCNDQDTRTSYRIGDTWSK-KDNRGNLLQCICTGNGRGEWKCERH-TS-   47
1tpn.pdb                1  SYQVICRDEKTQMIYQQHQSWLRPVLRSNRVEYCW--CNS-GRAQCHSVPVKS   50
                                C D  t tsY  g tW k          C   gng Gr  C s     


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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