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# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Fri Jul 22 19:45:49 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/EPSP_syntase.html
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#====================================
# Aligned_structures: 2
#   1: 1ejda.pdb
#   2: 1g6sa.pdb
#
# Length:        462
# Identity:       85/462 ( 18.4%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     85/462 ( 18.4%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           79/462 ( 17.1%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1ejda.pdb               1  MDKFRVQGPTRLQGEVTISGAKNAALPILFAALLAEEPVEIQNVPKLKDIDTTMKLLTQL   60
1g6sa.pdb               1  MESLTLQPIARVDGTINLPGSKSVSNRALLLAALAHGKTVLTNLLDSDDVRHMLNALTAL   60
                           M     Q   R  G     G K      L  A LA       N     D       LT L

1ejda.pdb              61  GTKVER----GSVWIDA-SNVNN------FSAPYDLVKTMRASIWALGPLVARFGQGQVS  109
1g6sa.pdb              61  GVSYTLSADRTRCEIIGNGGPLHAEGALELFLGNAGT----AMRPLAAALCL--GSNDIV  114
                           G             I                          A       L    G     

1ejda.pdb             110  LPGGCA----IGARPVDLHIFGLEKLGAEIKLEEG----YVKASVNGRLKGAHIVMDK-V  160
1g6sa.pdb             115  LT----GEPRMKERPIGHLVDALRLGGAKITYLEQENYPPLRLQGG--FTGGNVDVDGSV  168
                           L            RP       L   GA I   E                G     D  V

1ejda.pdb             161  SVGATVTIMSAATLAEGTTIIEN--AA-REPEIVDTANFLVALGAKISGQG-TDRITIEG  216
1g6sa.pdb             169  SSQFLTALLMTAPLAPEDTVIRIKGDLVSKPYIDITLNLMKTFGVEIEN-QHYQQFVVKG  227
                           S          A LA   T I         P I  T N     G  I            G

1ejda.pdb             217  VERLG-GGVYRVLPDRIETGTFLVAAAISGGKIVCRNAQPD--T-LD-AVLAKLREAGAD  271
1g6sa.pdb             228  GQSYQSPGTYLVEGDASSASYFLAAAAIKGGTVKVTGIGR-NSMQGDIRFADVLEKMGAT  286
                                  G Y V  D      FL AAAI GG               D      L   GA 

1ejda.pdb             272  IETGEDWISLDMHGKRPKAVTVRTAPHPA--FPTDMQAQFTLLNLVAEGTGVITE-TIFE  328
1g6sa.pdb             287  ICWGDDYISCTR--GELNAIDMD------MNHIPDAAMTIATAALFAKGTTTLRNIYNW-  337
                           I  G D IS         A               D         L A GT          

1ejda.pdb             329  NR--------FMHVPELIRMGAHAEIESNTVICHGVEKLSGAQVMA-TDLRASASLVLAG  379
1g6sa.pdb             338  --RVKETDRLFAMATELRKVGAEVEEGHDYIRITPPEKLNFAEIATYNDHRMAMCFSLVA  395
                                     F    EL   GA  E           EKL  A      D R      L  

1ejda.pdb             380  CIAEGTTVVDRIYHIDRGYERIEDKLRALGANIERVKGE---  418
1g6sa.pdb             396  -LSDTPVTILDPKCTAKTFPDYFEQLARIS---------QAA  427
                                                    L                


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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