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# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Sat Jul 23 02:02:09 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/EGF_Lam.html
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#====================================
# Aligned_structures: 3
#   1: 1klo1.pdb
#   2: 1klo2.pdb
#   3: 1klo3.pdb
#
# Length:         73
# Identity:        6/ 73 (  8.2%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     21/ 73 ( 28.8%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           35/ 73 ( 47.9%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1klo1.pdb               1  ---CPCPGGSSCAIVPKT------KEVVCTHCPTGTAGKRCELCDDGYFGDPL---GS-N   47
1klo2.pdb               1  ---CQCNDNI----DPNAVGNCNRLTGECLKCIYNTAGFYCDRCKEGFFGNPLAPNP-AD   52
1klo3.pdb               1  CAC--NPYGT----VQQQS-SCNPVTGQC-QCLPHVSGRDCGTCDPGYYNL-QSGQGC-E   50
                                cp g     vp         tg C  C   taG  C  Cd Gyfg  l   g   

1klo1.pdb              48  -GPVRLCRP----   55
1klo2.pdb              53  ---------KCKA   56
1klo3.pdb              51  R------------   51
                                        


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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