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# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Sat Jul 23 02:01:12 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/EF1BD.html
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#====================================
# Aligned_structures: 3
#   1: 1b64.pdb
#   2: 1f60b.pdb
#   3: 1gh8a.pdb
#
# Length:        104
# Identity:        9/104 (  8.7%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     53/104 ( 51.0%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           26/104 ( 25.0%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1b64.pdb                1  -MLVA-KSS--ILLDVKPWDDETDMAKLEECVRSIQAD--GLVWGSSKLVPVGYGIKKLQ   54
1f60b.pdb               1  -----PAAKSIVTLDVKPWDDETNLEEMVANVKAI-E-MEGLTWGAHQFIPIGFGIKKLQ   53
1gh8a.pdb               1  M----GDVV--ATIKVMPESPDVDLEALKKEIQERIPE--GTELHKIDEEPIAFGLVALN   52
                                       tldVkPwddetdle l   v  i     Gl wg     PigfGikkLq

1b64.pdb               55  IQCVVE----DDKVGTDMLEEQITA-FEDYVQSMD-VAAFNKI-   91
1f60b.pdb              54  INCVVE----DDKVSLDDLQQSIEE-DEDHVQSTD-IAAMQKL-   90
1gh8a.pdb              53  VMVVVGDAEG----GTEAAEESLSGIE---GVSNIEVTDVRRLM   89
                           i cVVe        gtd leesi       vqS d vaa  kl 


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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