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# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Mon Jul 25 17:37:46 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/DEATH.html
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#====================================
# Aligned_structures: 7
#   1: 1d2za.pdb
#   2: 1d2zb.pdb
#   3: 1ddf.pdb
#   4: 1e41a.pdb
#   5: 1fada.pdb
#   6: 1icha.pdb
#   7: 1ngr.pdb
#
# Length:        204
# Identity:        2/204 (  1.0%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:      5/204 (  2.5%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:          131/204 ( 64.2%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1d2za.pdb               1  --------------------------PATLYAVVENVPP--LRWKEFVKRL---------   23
1d2zb.pdb               1  -METVAINLS-----------DVDLSKYITTIAGVM-TL--SQVKGFVRKN---------   36
1ddf.pdb                1  ----------------GNLYSSL--PLTKREEVEKLLNG--DTWRHLAGEL---------   31
1e41a.pdb               1  LSSK------YSR---NTELRRV--EDNDIYRLAKILD-ENSCWRKLMSIIPKGMDVQAC   48
1fada.pdb               1  -----GSHMG-----------E-EDLCAAFNVICDN-VG--KDWRRLARQL---------   31
1icha.pdb               1  -------------LDNTMAIRLL--PLPVRAQLCAHLD-ALDVWQQLATAV---------   35
1ngr.pdb                1  ----AAP-PG-----------E-AYLQVAFDIVCDN-VG--RDWKRLAREL---------   31
                                                                      w                

1d2za.pdb              24  ----------------GLSDHEIDRLELQNGRCLR------EAQYSMLATWRRR----TP   57
1d2zb.pdb              37  ----------------GVNEAKIDEIKNDNVQDTA------EQKVQLLRNWHQL----H-   69
1ddf.pdb               32  ----------------GYQPEHIDSFTHEA-----------CPVRALLASWGAQ----D-   59
1e41a.pdb              49  SGAGCLNFPAEIKKGFKYTAQDVFQIDEAAN----RLPPDQSKSQMMIDEWKTSGKLNE-  103
1fada.pdb              32  ----------------KVSDTKIDSIEDRYPRNLT------ERVRESLRIWKNT----E-   64
1icha.pdb              36  ----------------KLYPDQVEQISSQKQ-----R-G-RSASNEFLNIWGGQ----Y-   67
1ngr.pdb               32  ----------------KVSEAKMDGIEEKYPRSLS------ERVRESLKVWKNA----E-   64
                                                                          l  W         

1d2za.pdb              58  RREA-TLELLGRVLRDMD----LLGCLEDIEEA-------L---------------C---   87
1d2zb.pdb              70  GKKE-AYDTLIKDLKKANLCTLAEKIQTIILKD-----------------------ITSD  105
1ddf.pdb               60  S---ATLDALLAALRRIQ----RADIVESLCSE---------------------------   85
1e41a.pdb             104  R---PTVGVLLQLLVQAE----LFSAADFVALDFLNESTPARP--VDGPGALISLE----  150
1fada.pdb              65  KEN-ATVAHLVGALRSCQ----MNLVADLVQEV--------QQAR-----------DLQ-   99
1icha.pdb              68  N---HTVQTLFALFKKLK----LHNAMRLIKD--------YVS--EDLH-------KY--  101
1ngr.pdb               65  KKN-ASVAGLVKALRTCR----LNLVADLVEEA-----------------------QE--   94
                                    L   l                                              

1d2za.pdb                  ------------------------     
1d2zb.pdb             106  SENSNFRNEIQSLVLEHHHHHH--  127
1ddf.pdb                   ------------------------     
1e41a.pdb                  ------------------------     
1fada.pdb             100  NR--SGA-----------------  104
1icha.pdb             102  -----------------------I  102
1ngr.pdb               95  ----------------------S-   95
                                                   


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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