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# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Sat Jul 23 01:33:42 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/Colicin_Pyocin.html
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#====================================
# Aligned_structures: 3
#   1: 1bxia.pdb
#   2: 1imz.pdb
#   3: 1unka.pdb
#
# Length:         96
# Identity:       37/ 96 ( 38.5%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     60/ 96 ( 62.5%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           22/ 96 ( 22.9%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1bxia.pdb               1  --LKASISDYTEAEFLQLVTTICNA----DTSSEEELVKLVTHFEEMTEHPSGSDLIYYP   54
1imz.pdb                1  MELKNSISDYTETEFKKIIEDIINC----EG-DEKKQDDNLEHFISVTEHPSGSDLIYY-   54
1unka.pdb               1  MELKNSISDYTEAEFVQLLKEIEKENVAA---TDDVLDVLLEHFVKITEHPDGTDLIYYP   57
                             LKnSISDYTEaEF ql   I n         e  ld lleHF   TEHPsGsDLIYY 

1bxia.pdb              55  KEGDDD------SPSGIVNTVQQWRAANGKSGFKQ-   83
1imz.pdb               55  P-----EGNNDGSPEAVIKEIKEWRAANGKSGFKQG   85
1unka.pdb              58  SDNRDD------SPEGIVKEIKEWRAANGKPGFKQG   87
                                       SPegivkeikeWRAANGKsGFKQ 


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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