################################################################################################
# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Fri Jul 22 18:47:39 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/Arthro_defensin.html
################################################################################################
#====================================
# Aligned_structures: 2
#   1: 1fjna.pdb
#   2: 1ica.pdb
#
# Length:         50
# Identity:        7/ 50 ( 14.0%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:      7/ 50 ( 14.0%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           21/ 50 ( 42.0%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1fjna.pdb               1  GFGCP-----------NNYQCHRHCKSIPGRCGGYCGGWHRLRCTCYRCG   39
1ica.pdb                1  -----ATCDLLSGTGINHSACAAHCLLRG-N-RGGYCNG-KGVCVCRN--   40
                                           N   C  HC        G         C C    


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
################################################EOF#################################################